Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G091100.1 | Wheat | nucleus | 99.19 | 99.28 |
| TraesCS1B01G118900.2 | Wheat | nucleus | 99.01 | 99.1 |
| HORVU1Hr1G021540.17 | Barley | plasma membrane | 98.01 | 91.87 |
| CDY47176 | Canola | cytosol | 38.3 | 89.45 |
| Os05t0150300-01 | Rice | nucleus | 88.35 | 84.46 |
| CDY18857 | Canola | nucleus | 78.23 | 82.55 |
| KRH11241 | Soybean | nucleus | 79.86 | 82.46 |
| Bra040221.1-P | Field mustard | nucleus | 78.14 | 82.46 |
| KRH21031 | Soybean | nucleus | 79.31 | 82.29 |
| AT3G06400.3 | Thale cress | nucleus | 78.32 | 82.02 |
| KRH50913 | Soybean | nucleus | 78.32 | 81.95 |
| VIT_05s0020g01780.t01 | Wine grape | nucleus | 79.86 | 81.85 |
| Solyc06g054560.2.1 | Tomato | nucleus | 78.23 | 81.62 |
| PGSC0003DMT400079102 | Potato | nucleus | 77.87 | 81.47 |
| KRH02212 | Soybean | nucleus | 77.87 | 81.4 |
| CDY24695 | Canola | nucleus | 77.24 | 81.2 |
| Bra020751.1-P | Field mustard | nucleus | 77.06 | 81.01 |
| GSMUA_Achr3P23910_001 | Banana | nucleus | 77.96 | 80.73 |
| PGSC0003DMT400058376 | Potato | nucleus | 77.51 | 80.64 |
| AT5G18620.2 | Thale cress | nucleus | 78.05 | 80.6 |
| Solyc01g067390.2.1 | Tomato | nucleus | 77.42 | 80.47 |
| CDX92595 | Canola | nucleus | 64.5 | 79.87 |
| Bra002173.1-P | Field mustard | nucleus | 76.06 | 79.14 |
| CDY13907 | Canola | nucleus | 75.7 | 79.13 |
| TraesCS3D01G068900.1 | Wheat | nucleus | 78.32 | 77.34 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 77.33 | 75.55 |
| CDY02609 | Canola | nucleus | 72.0 | 75.55 |
| Bra023689.1-P | Field mustard | nucleus | 73.71 | 74.11 |
| TraesCS7D01G069700.1 | Wheat | cytosol | 24.12 | 34.27 |
| TraesCS4D01G053600.2 | Wheat | cytosol | 24.3 | 32.22 |
| TraesCS2D01G365000.1 | Wheat | cytosol | 23.76 | 32.03 |
| TraesCS1D01G089200.2 | Wheat | nucleus | 26.83 | 26.12 |
| TraesCS4D01G364600.1 | Wheat | cytosol, mitochondrion | 19.78 | 24.83 |
| TraesCS2D01G400400.1 | Wheat | cytosol | 17.89 | 22.53 |
| TraesCS2D01G130900.1 | Wheat | nucleus | 32.52 | 20.83 |
| TraesCS3D01G403600.1 | Wheat | nucleus | 23.04 | 20.77 |
| TraesCS7D01G148900.4 | Wheat | nucleus | 25.2 | 19.86 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 22.04 | 16.33 |
| TraesCS6D01G039800.1 | Wheat | nucleus, plastid | 25.65 | 12.83 |
| TraesCS7D01G531100.1 | Wheat | nucleus | 24.93 | 12.71 |
| TraesCS2D01G234200.1 | Wheat | nucleus | 25.29 | 12.46 |
| TraesCS7D01G206700.2 | Wheat | nucleus | 27.55 | 9.06 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:1.10.1040.30 | MapMan:12.4.1.1.4 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006338 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016589 | GO:GO:0016787 | GO:GO:0016818 |
| GO:GO:0016887 | GO:GO:0031491 | GO:GO:0043044 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:Homeobox-like_sf |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR017884 | InterPro:IPR036306 | InterPro:IPR038718 | InterPro:ISWI |
| InterPro:ISWI_HAND-dom | InterPro:ISWI_HAND-dom_sf | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF09110 |
| PFAM:PF09111 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51293 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF887 |
| InterPro:SANT/Myb | InterPro:SANT_dom | InterPro:SLIDE | SMART:SM00487 | SMART:SM00490 | SMART:SM00717 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF101224 | SUPFAM:SSF46689 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS1D01G099600 |
| EnsemblPlants:TraesCS1D01G099600.1 | TIGR:cd00046 | TIGR:cd00079 | TIGR:cd00167 | SEG:seg | : |
Description
No Description!
Coordinates
chr1D:+:86914342..86924075
Molecular Weight (calculated)
127305.0 Da
IEP (calculated)
4.717
GRAVY (calculated)
-0.882
Length
1107 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGKPAEYGDE DDEELSSSGD AEGEEEQQEE EGSDDGEEDE EDEEEEQEPE GEQAAGDGED AEEEVDEEEI VAATTGAGAD DDDDDGGDGA GAAEEAESTE
0101: DDAAAEEGGE EDADESEDAT AKTEIGKRER AKLREMQKLK KQKIQEILDS QNASIDADMN KKGKGRLKYL LQQTEIFAHF AKGSQAAEKK NRGKGRHASK
0201: VTEEEEDEEY LKEEDALAAG GTRLLIQPSC INGKMRDYQL AGLNWLIRLY ENGINGILAD EMGLGKTLQT ISLLGYLHEF RGITGPHMVV APKSTLGNWM
0301: KEIQRFCPVL RAVKFLGNPE ERNHIRENLL APGKFDVCVT SFEMAIKEKT ALRRFSWRYI IIDEAHRIKN ENSLLSKTMR LFSTNYRLLI TGTPLQNNLH
0401: ELWSLLNFLL PEIFSSAETF DEWFQISGEN DQHEVVQQLH KVLRPFLLRR LKSDVEKGLP PKKETILKVG MSEMQKQYYR ALLQKDLEVI NAGGERKRLL
0501: NIAMQLRKCC NHPYLFQGAE PGPPYTTGDH LIENAGKMVL LDKLLPKLKA RDSRVLIFSQ MTRLLDILED YLMYRGYQYC RIDGNTGGDD RDASIEAFNK
0601: PGSEKFIFLL STRAGGLGIN LATADIVVLY DSDWNPQVDL QAQDRAHRIG QKKEVQVFRF CTEYTIEEKV IERAYKKLAL DALVIQQGRL AEQKAVNKDE
0701: LLQMVRFGAE MVFSSKDSTI TDEDIDRIIA RGEEATAQLD AKMKKFTEDA IKFKMDDTAE LYDFDDDKEE DKPDFKKLVS DNWIEPPRRE RKRNYSESEY
0801: FKQALRQGAP AKPREPRIPR MPNLHDFQFF NTQRLNELYE KEVKYLVQTN QKKDTIGDGD GEDEEVEPLN EEEQEEKEQL LEEGFSTWTR RDFNTFIRAC
0901: EKYGRDDIKS IASEMEGKTE EEVQRYAEVF KERYTELNDY DRIIKNIEKG ESKISRKDEI MKAIAKKMDR YKNPWLELKI QYGQNKGKLY NEECDRFLLC
1001: MVHKLGYGNW EELKSAFRMS PLFRFDWFVK SRTTQELARR CDTLIRLVEK ENQECDERDR QARKDKKNMT PTKRPSSSSP AMDSPMQTPS KRGRRDGSAP
1101: SGKRRRR
0101: DDAAAEEGGE EDADESEDAT AKTEIGKRER AKLREMQKLK KQKIQEILDS QNASIDADMN KKGKGRLKYL LQQTEIFAHF AKGSQAAEKK NRGKGRHASK
0201: VTEEEEDEEY LKEEDALAAG GTRLLIQPSC INGKMRDYQL AGLNWLIRLY ENGINGILAD EMGLGKTLQT ISLLGYLHEF RGITGPHMVV APKSTLGNWM
0301: KEIQRFCPVL RAVKFLGNPE ERNHIRENLL APGKFDVCVT SFEMAIKEKT ALRRFSWRYI IIDEAHRIKN ENSLLSKTMR LFSTNYRLLI TGTPLQNNLH
0401: ELWSLLNFLL PEIFSSAETF DEWFQISGEN DQHEVVQQLH KVLRPFLLRR LKSDVEKGLP PKKETILKVG MSEMQKQYYR ALLQKDLEVI NAGGERKRLL
0501: NIAMQLRKCC NHPYLFQGAE PGPPYTTGDH LIENAGKMVL LDKLLPKLKA RDSRVLIFSQ MTRLLDILED YLMYRGYQYC RIDGNTGGDD RDASIEAFNK
0601: PGSEKFIFLL STRAGGLGIN LATADIVVLY DSDWNPQVDL QAQDRAHRIG QKKEVQVFRF CTEYTIEEKV IERAYKKLAL DALVIQQGRL AEQKAVNKDE
0701: LLQMVRFGAE MVFSSKDSTI TDEDIDRIIA RGEEATAQLD AKMKKFTEDA IKFKMDDTAE LYDFDDDKEE DKPDFKKLVS DNWIEPPRRE RKRNYSESEY
0801: FKQALRQGAP AKPREPRIPR MPNLHDFQFF NTQRLNELYE KEVKYLVQTN QKKDTIGDGD GEDEEVEPLN EEEQEEKEQL LEEGFSTWTR RDFNTFIRAC
0901: EKYGRDDIKS IASEMEGKTE EEVQRYAEVF KERYTELNDY DRIIKNIEKG ESKISRKDEI MKAIAKKMDR YKNPWLELKI QYGQNKGKLY NEECDRFLLC
1001: MVHKLGYGNW EELKSAFRMS PLFRFDWFVK SRTTQELARR CDTLIRLVEK ENQECDERDR QARKDKKNMT PTKRPSSSSP AMDSPMQTPS KRGRRDGSAP
1101: SGKRRRR
0001: MARNSNSDEA FSSEEEEERV KDNEEEDEEE LEAVARSSGS DDDEVAAADE SPVSDGEAAP VEDDYEDEED EEKAEISKRE KARLKEMQKL KKQKIQEMLE
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE EGGDPLTTEE VEEKEGLLEE GFSTWSRRDF NTFLRACEKY GRNDIKSIAS EMEGKTEEEV ERYAKVFKER YKELNDYDRI
0901: IKNIERGEAR ISRKDEIMKA IGKKLDRYRN PWLELKIQYG QNKGKLYNEE CDRFMICMIH KLGYGNWDEL KAAFRTSSVF RFDWFVKSRT SQELARRCDT
1001: LIRLIEKENQ EFDERERQAR KEKKLAKSAT PSKRPLGRQA SESPSSTKKR KHLSMR
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE EGGDPLTTEE VEEKEGLLEE GFSTWSRRDF NTFLRACEKY GRNDIKSIAS EMEGKTEEEV ERYAKVFKER YKELNDYDRI
0901: IKNIERGEAR ISRKDEIMKA IGKKLDRYRN PWLELKIQYG QNKGKLYNEE CDRFMICMIH KLGYGNWDEL KAAFRTSSVF RFDWFVKSRT SQELARRCDT
1001: LIRLIEKENQ EFDERERQAR KEKKLAKSAT PSKRPLGRQA SESPSSTKKR KHLSMR
Arabidopsis Description
CHR11Chromatin-remodeling protein 11 [Source:UniProtKB/TrEMBL;Acc:F4JAV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.