Factsheet for AT2G02090.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04120	Canola	cytosol	90.43	90.79
Bra017422.1-P	Field mustard	cytosol	90.3	90.42
CDY48619	Canola	nucleus, plastid	90.3	90.07
VIT_01s0010g02080.t01	Wine grape	cytosol	73.13	76.65
KRG89166	Soybean	nucleus	72.74	73.8
KRH49484	Soybean	nucleus	72.74	73.61
Solyc02g014770.2.1	Tomato	nucleus	68.15	70.46
Zm00001d015595_P001	Maize	cytosol	16.38	63.45
GSMUA_Achr4P25930_001	Banana	cytosol	66.19	62.58
Os04t0566100-00	Rice	cytosol	67.37	59.56
TraesCS2A01G403300.2	Wheat	cytosol, nucleus	65.14	57.19
TraesCS2D01G400400.1	Wheat	cytosol	65.79	57.11
TraesCS2B01G421200.3	Wheat	cytosol	65.27	55.89
KXG26914	Sorghum	nucleus	67.1	52.73
Zm00001d002656_P002	Maize	nucleus	66.32	51.69
AT5G66750.1	Thale cress	cytosol	25.56	25.52
AT2G44980.2	Thale cress	cytosol	22.94	19.95
AT5G19310.1	Thale cress	nucleus	27.39	19.64
AT3G06010.1	Thale cress	nucleus	27.52	19.06
AT3G06400.3	Thale cress	nucleus	26.34	19.02
AT5G18620.2	Thale cress	nucleus	26.47	18.84
AT4G31900.1	Thale cress	nucleus	24.51	15.56
AT3G57300.2	Thale cress	cytosol	28.31	14.03
AT2G25170.3	Thale cress	endoplasmic reticulum	25.69	13.9
AT2G13370.2	Thale cress	nucleus	26.21	11.6
AT3G12810.1	Thale cress	nucleus	29.88	11.09
AT2G46020.3	Thale cress	plastid	26.08	9.07
AT5G44800.1	Thale cress	nucleus	25.43	8.73
AT2G28290.5	Thale cress	nucleus	26.74	5.71
PGSC0003DMT400011842	Potato	nucleus	3.28	3.62
Os02t0114033-00	Rice	nucleus	2.23	1.97
Os02t0114000-01	Rice	cytosol, nucleus	0.0	0.0

Protein Annotations

MapMan:12.4.1.2.1	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	EntrezGene:814740	UniProt:A0A178VWA6	ProteinID:AAC97224.1
ProteinID:AEC05545.1	ArrayExpress:AT2G02090	EnsemblPlantsGene:AT2G02090	RefSeq:AT2G02090	TAIR:AT2G02090	RefSeq:AT2G02090-TAIR-G
EnsemblPlants:AT2G02090.1	TAIR:AT2G02090.1	EMBL:AY059857	Unigene:At.13358	EMBL:BT002576	Symbol:CHR19
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0004386
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006325	GO:GO:0006351
GO:GO:0006355	GO:GO:0006950	GO:GO:0006974	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009987	GO:GO:0016043	GO:GO:0016569	GO:GO:0016787	GO:GO:0031047
GO:GO:0071494	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718
RefSeq:NP_178318.1	ProteinID:OAP10649.1	InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799
PANTHER:PTHR10799:SF845	UniProt:Q9ZUL5	SMART:SM00487	SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N
SUPFAM:SSF52540	UniParc:UPI00000AC24C	SEG:seg	:	:	:

Description

ETL1ETL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWA6]

Coordinates

chr2:+:523223..527068

Molecular Weight (calculated)

86281.8 Da

IEP (calculated)

5.456

GRAVY (calculated)

-0.427

Length

763 amino acids

Sequence
(BLAST)

001: MKRDFDEISE EEWSQHSFNA SRVLKRPRTP KKTRAATNPT PSIESFAFRR PSTAMTIESN SSDGDCVEIE DLGDSDSDVK IVNGEDLLLE DEEEVEETKV
101: VMRAARVGRR FVIEDEEASD DDDDEAESSA SEDEFGGGGG GSGGRRGEDE DVVGKALQKC AKISADLRKE LYGTSSGVTD RYSEVETSTV RIVTQNDIDD
201: ACKAEDSDFQ PILKPYQLVG VNFLLLLYKK GIEGAILADE MGLGKTIQAI TYLTLLSRLN NDPGPHLVVC PASVLENWER ELRKWCPSFT VLQYHGAARA
301: AYSRELNSLS KAGKPPPFNV LLVCYSLFER HSEQQKDDRK VLKRWRWSCV LMDEAHALKD KNSYRWKNLM SVARNANQRL MLTGTPLQND LHELWSLLEF
401: MLPDIFTTEN VDLKKLLNAE DTELITRMKS ILGPFILRRL KSDVMQQLVP KIQRVEYVLM ERKQEDAYKE AIEEYRAASQ ARLVKLSSKS LNSLAKALPK
501: RQISNYFTQF RKIANHPLLI RRIYSDEDVI RIARKLHPIG AFGFECSLDR VIEEVKGFND FRIHQLLFQY GVNDTKGTLS DKHVMLSAKC RTLAELLPSM
601: KKSGHRVLIF SQWTSMLDIL EWTLDVIGVT YRRLDGSTQV TDRQTIVDTF NNDKSIFACL LSTRAGGQGL NLTGADTVII HDMDFNPQID RQAEDRCHRI
701: GQTKPVTIFR LVTKSTVDEN IYEIAKRKLV LDAAVLESGV HVDDNGDTPE KTMGEILASL LMG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.