Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g007330.1.1 | Tomato | nucleus | 76.47 | 28.36 |
| EER89143 | Sorghum | nucleus | 5.43 | 12.0 |
| GSMUA_Achr7P22950_001 | Banana | cytosol | 4.07 | 8.49 |
| TraesCS5D01G314800.1 | Wheat | golgi | 19.0 | 8.08 |
| TraesCS5A01G304300.1 | Wheat | cytosol, mitochondrion | 18.55 | 5.42 |
| AT4G32200.1 | Thale cress | nucleus | 28.05 | 4.43 |
| Os01t0165800-01 | Rice | cytosol | 0.45 | 0.24 |
| Solyc05g015360.2.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc05g015380.2.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc05g015370.2.1 | EnsemblPlantsGene:Solyc05g015370.2 | Gene3D:3.30.900.10 | InterPro:HORMA_dom | InterPro:HORMA_dom_sf | InterPro:IPR003511 |
| InterPro:IPR036570 | PANTHER:PTHR45173 | PFAM:PF02301 | SEG:seg | UniParc:UPI0002766A81 | UniProt:K4BYQ3 |
| MapMan:13.3.6.1.4 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:10443350..10446394
Molecular Weight (calculated)
25086.3 Da
IEP (calculated)
4.287
GRAVY (calculated)
-0.684
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKGGTFKSN STDEITPNQM RSSACKMRTI LLRLIYHDDV TPADYEPPFF RGCTEEEALN PWTKNPLKSE VGNVNSKHLV LALKVLRVCL ILDDNKDDVM
101: SLGADSAERD DSASDTEFSD SNEDQYIVAP VEKKNDQDKG DMVDEDDTQD PPEDEQQLVR VKDWISTYHL DRVEVTDVLS NFPNISVVLI EDNLEKLVKE
201: GILSSAGRDT YITKMQKKFD Y
101: SLGADSAERD DSASDTEFSD SNEDQYIVAP VEKKNDQDKG DMVDEDDTQD PPEDEQQLVR VKDWISTYHL DRVEVTDVLS NFPNISVVLI EDNLEKLVKE
201: GILSSAGRDT YITKMQKKFD Y
001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
Arabidopsis Description
ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.