Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g015360.2.1 | Tomato | nucleus | 9.38 | 67.62 |
| EER89143 | Sorghum | nucleus | 8.45 | 64.0 |
| GSMUA_Achr7P22950_001 | Banana | cytosol | 4.62 | 33.02 |
| TraesCS5A01G286500.1 | Wheat | nucleus | 20.34 | 28.79 |
| Solyc05g015370.2.1 | Tomato | cytosol | 5.42 | 18.55 |
| TraesCS5D01G314800.1 | Wheat | golgi | 12.55 | 18.27 |
| AT4G32200.1 | Thale cress | nucleus | 11.49 | 6.22 |
| Solyc05g015380.2.1 | Tomato | cytosol | 1.06 | 5.93 |
| Os01t0165800-01 | Rice | cytosol | 1.19 | 2.13 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G304300.1 | EnsemblPlantsGene:TraesCS5A01G304300 | Gene3D:3.30.900.10 | InterPro:HORMA_dom | InterPro:HORMA_dom_sf | InterPro:IPR003511 |
| InterPro:IPR036570 | ncoils:Coil | PANTHER:PTHR45173 | PFAM:PF02301 | PFscan:PS50815 | SEG:seg |
| SUPFAM:SSF56019 | MapMan:13.3.6.1.4 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:512972708..512977614
Molecular Weight (calculated)
84624.3 Da
IEP (calculated)
3.649
GRAVY (calculated)
-1.013
Length
757 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKMKIKKLM LRDAESRRSS ACKMIRTLVS LVRTLDQMPK ERTILMKLLY YDDATPEDYK PPFFKGCVEN EAVNIWNKNP LKMEVGNVNS KHLVLALKVK
101: SVLDPCDANS DDDKMSMGHV SDQEDFTDTE TTNLLRIAIY NISYIRGLFP EKYFNDKSVP ALEMKIKKLM PMDAESRRLI DWMEKGVYDA LQKKYLNTLL
201: FCICEKEEGP MIEEYAFSFS YPNTNGEEVA MNMSHTGSKK NTATFKSNAA EVTPDQMRSS ACKMTRTLAS VMRALDQLPE EALCFVNEVG MGKPTNALPV
301: DNSACITFSL PLKQKAGASD SAPSKPLSEA RKGKESSNIG SATDVSLRKA AANSSAGDGD DPNKGNTPDI SNNDAVPFRT RVIADLAGLD PAQVILILAD
401: AGSMEEMIQL STVANERGFI FERTESLQHV SLRVSMDRYV QAQAGLQDAV ENLDPDHNQL DEEEEQDDDE EEAAPAQQVN EDEVQDDEEA DDDDDDDDDD
501: DDDDDDDDEI NSQVADPDYI PEESQGEDDD DWYLVDLEEE EAAPAQHGEQ THEAAAHQAN EDEAQDNEEA EEDDDDDDEP DSQLADPDYM PEEEEEEEEE
601: QEQDDDEEEA APAQQVNEDE VQDDEEAEED DDDDDDEEAA PAQQVNEDEV QDDEEAQEDD DDDDEEAAPA QQVNEEAAPA QQVNEDEVQD DEEADDDDDD
701: DEINSQVADP DYIPEESHGE DDDDWYLVDL EEEEAAPAQH GEQAHEAAAH QANEDEA
101: SVLDPCDANS DDDKMSMGHV SDQEDFTDTE TTNLLRIAIY NISYIRGLFP EKYFNDKSVP ALEMKIKKLM PMDAESRRLI DWMEKGVYDA LQKKYLNTLL
201: FCICEKEEGP MIEEYAFSFS YPNTNGEEVA MNMSHTGSKK NTATFKSNAA EVTPDQMRSS ACKMTRTLAS VMRALDQLPE EALCFVNEVG MGKPTNALPV
301: DNSACITFSL PLKQKAGASD SAPSKPLSEA RKGKESSNIG SATDVSLRKA AANSSAGDGD DPNKGNTPDI SNNDAVPFRT RVIADLAGLD PAQVILILAD
401: AGSMEEMIQL STVANERGFI FERTESLQHV SLRVSMDRYV QAQAGLQDAV ENLDPDHNQL DEEEEQDDDE EEAAPAQQVN EDEVQDDEEA DDDDDDDDDD
501: DDDDDDDDEI NSQVADPDYI PEESQGEDDD DWYLVDLEEE EAAPAQHGEQ THEAAAHQAN EDEAQDNEEA EEDDDDDDEP DSQLADPDYM PEEEEEEEEE
601: QEQDDDEEEA APAQQVNEDE VQDDEEAEED DDDDDDEEAA PAQQVNEDEV QDDEEAQEDD DDDDEEAAPA QQVNEEAAPA QQVNEDEVQD DEEADDDDDD
701: DEINSQVADP DYIPEESHGE DDDDWYLVDL EEEEAAPAQH GEQAHEAAAH QANEDEA
001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
Arabidopsis Description
ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.