Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g015380.2.1 | Tomato | cytosol | 2.13 | 6.67 |
| Solyc05g015360.2.1 | Tomato | nucleus | 0.71 | 2.86 |
| Os12t0606600-01 | Rice | nucleus | 4.26 | 2.85 |
| Os09t0506800-02 | Rice | nucleus | 3.07 | 2.13 |
| TraesCS5D01G314800.1 | Wheat | golgi | 2.13 | 1.73 |
| TraesCS5A01G304300.1 | Wheat | cytosol, mitochondrion | 2.13 | 1.19 |
| AT4G32200.1 | Thale cress | nucleus | 3.31 | 1.0 |
| GSMUA_Achr7P22950_001 | Banana | cytosol | 0.24 | 0.94 |
| Solyc05g015370.2.1 | Tomato | cytosol | 0.24 | 0.45 |
| EER89143 | Sorghum | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.30.900.10 | MapMan:35.1 | EntrezGene:4327138 | UniProt:A0A0P0UZC1 | ProteinID:BAS70567.1 | InterPro:F-box-like_dom_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:HORMA_dom | InterPro:HORMA_dom_sf | InterPro:IPR003511 |
| InterPro:IPR036570 | EnsemblPlantsGene:Os01g0165800 | EnsemblPlants:Os01t0165800-01 | PFAM:PF02301 | PFscan:PS50815 | PANTHER:PTHR33207 |
| PANTHER:PTHR33207:SF12 | SUPFAM:SSF56019 | SUPFAM:SSF81383 | UniParc:UPI0003938A92 | RefSeq:XP_015621504.1 | SEG:seg |
Description
Os_F0651DNA-binding HORMA domain containing protein. (Os01t0165800-01)
Coordinates
chr1:-:3386766..3390803
Molecular Weight (calculated)
47605.1 Da
IEP (calculated)
5.658
GRAVY (calculated)
0.181
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDEEPPAA AAMAAVLTDD FLLRSILKCL CPRDVVRAAL ANKSWRRAAA LAVPRTPPLV GYLLHPEKIR SAQIPPVFVP SDASFPRLSL PLAPDDLSGV
101: SVHDVHHGLV LLLPCELPDI LLLRILVLDP ASGRRALLPP PPRDALPDDQ WRQTRRIIGA AVLSRAHPSR LHFQAVCVTI DDDRPRAWVA FVNGEDCLWC
201: ILPRSKHVRV LRFDLSMCCA AHDQGQICWI ASNSNQVLAL EPSSLEFQFI TSSPAAVPVD VFAYFLSWPP AFLSLLEEND DALTDSLMSL IKIVFYNICY
301: VRGLFSKEFF SDMPFLPTGM QIKKLTPMDD ESQRLVDWLE KGVYDALKKK FLKTIIFSIY DEKGPLLEEY CLSFTYFSEI TIDLRLTGST QSIWTMRSDA
401: AESFVNQICL WTMNLLFLRV MMI
101: SVHDVHHGLV LLLPCELPDI LLLRILVLDP ASGRRALLPP PPRDALPDDQ WRQTRRIIGA AVLSRAHPSR LHFQAVCVTI DDDRPRAWVA FVNGEDCLWC
201: ILPRSKHVRV LRFDLSMCCA AHDQGQICWI ASNSNQVLAL EPSSLEFQFI TSSPAAVPVD VFAYFLSWPP AFLSLLEEND DALTDSLMSL IKIVFYNICY
301: VRGLFSKEFF SDMPFLPTGM QIKKLTPMDD ESQRLVDWLE KGVYDALKKK FLKTIIFSIY DEKGPLLEEY CLSFTYFSEI TIDLRLTGST QSIWTMRSDA
401: AESFVNQICL WTMNLLFLRV MMI
001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
Arabidopsis Description
ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.