Factsheet for Os09t0506800-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os09t0280600-01
Os11t0146800-01
Os12t0143800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G67370.1	Os11t0146800-01	AT3G22880.1	17937504
AT1G67370.1	Os12t0143800-01	AT3G22880.1	17937504
AT1G67370.1	Os09t0280600-01	AT4G29170.1	17937504

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G294100.1	Wheat	nucleus	79.34	81.76
TraesCS5B01G285800.1	Wheat	nucleus	71.48	81.04
TraesCS5A01G286500.1	Wheat	nucleus	70.98	80.93
OQU89747	Sorghum	plastid	80.16	75.81
Zm00001d006089_P002	Maize	nucleus	57.21	73.17
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	59.84	57.84
Solyc04g007330.1.1	Tomato	nucleus	56.23	57.55
AT1G67370.1	Thale cress	nucleus	54.75	56.04
KRG97420	Soybean	nucleus	55.08	54.99
Bra004222.1-P	Field mustard	nucleus	53.28	54.26
PGSC0003DMT400074843	Potato	cytosol	49.18	53.86
CDY01805	Canola	nucleus	52.79	52.44
CDX96096	Canola	cytosol	52.95	51.93
CDY28889	Canola	endoplasmic reticulum, extracellular	43.61	48.63
KRH31480	Soybean	nucleus	38.52	47.67
OQU89777	Sorghum	nucleus	53.93	46.34
Os12t0606600-01	Rice	nucleus	20.98	20.29
Os01t0165800-01	Rice	cytosol	2.13	3.07

Protein Annotations

MapMan:13.3.6.1.4	Gene3D:3.30.900.10	EntrezGene:4347514	EMBL:AB109238	EMBL:AC108753	EMBL:AK064028
ProteinID:BAF25524.1	ProteinID:BAT08867.1	ProteinID:BAT08868.1	GO:GO:0000003	GO:GO:0000228	GO:GO:0000775
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0007049
GO:GO:0007129	GO:GO:0007275	GO:GO:0008150	GO:GO:0009554	GO:GO:0009556	GO:GO:0009987
GO:GO:0016043	GO:GO:0051321	InterPro:HORMA_dom	InterPro:HORMA_dom_sf	InterPro:IPR003511	InterPro:IPR036570
EnsemblPlantsGene:Os09g0506800	EnsemblPlants:Os09t0506800-02	PFAM:PF02301	PFscan:PS50815	PANTHER:PTHR45173	UniProt:Q76CY8
SUPFAM:SSF56019	UniParc:UPI00001DF929	RefSeq:XP_015612272.1	RefSeq:XP_015612273.1	SEG:seg	:

Description

HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS 2Similar to Meiotic asynaptic mutant 1. (Os09t0506800-01);Similar to Essential protein for meiotic synapsis. (Os09t0506800-02)

Coordinates

chr9:+:19620684..19628678

Molecular Weight (calculated)

68806.9 Da

IEP (calculated)

4.953

GRAVY (calculated)

-0.620

Length

610 amino acids

Sequence
(BLAST)

001: MVMAQKTKEA EITEQDSLLL TRNLLRIAIY NISYIRGLFP EKYFNDKSVP ALEMKIKKLM PMDTESRRLI DWMEKGVYDA LQKKYLKTLL FCICEKEEGP
101: MIEEYAFSFS YPNTSGDEVA MNLSRTGSKK NSATFKSNAA EVTPDQMRSS ACKMIRTLVS LMRTLDQMPE ERTILMKLLY YDDVTPEDYE PPFFKCCADN
201: EAINIWNKNP LKMEVGNVNS KHLVLALKVK SVLDPCDDNN VNSEDDNMSL DNESDQDNDF SDTEVRPSEA ERYIVAPNDG TCKGQNGTIS EDDTQDPVHE
301: EELTAQVREW ICSRDTESLE VSDVLVNFPD ISMEMVEDIM ERLLKDGLLS RAKKDSYSVN KIADPTTPHI KKEVIMQNVS PTEGTKNSNG DLMYMKALYH
401: ALPMDYVSVG KLHGKLDGEA SQNMVRKLIE KMVQDGYVKN SANRRLGKAV IHSEVTNRKL LEIKKILEVD IAEQMAIDTN AEPGEPERKD HLSGHEMRDG
501: STMGCLQSVG SDLTRTRELP EPQQNVSMQS GQEASTVDKD PSRTPTSVRE QASVCSLESG VLGQKVRKSL AGAGGTQCSQ DKRFRKASTV KEPILQYVKR
601: QKSQVQVQVQ

Best Arabidopsis Sequence Match ( AT1G67370.1 )
(BLAST)

001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN

Arabidopsis Description

ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.