Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU89747 | Sorghum | plastid | 86.58 | 64.03 |
| TraesCS5A01G286500.1 | Wheat | nucleus | 64.99 | 57.94 |
| Os09t0506800-02 | Rice | nucleus | 73.17 | 57.21 |
| TraesCS5B01G285800.1 | Wheat | nucleus | 64.15 | 56.88 |
| TraesCS5D01G294100.1 | Wheat | nucleus | 63.94 | 51.52 |
| KRH31480 | Soybean | nucleus | 41.09 | 39.76 |
| PGSC0003DMT400074843 | Potato | cytosol | 45.28 | 38.78 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 50.1 | 37.88 |
| Solyc04g007330.1.1 | Tomato | nucleus | 45.07 | 36.07 |
| AT1G67370.1 | Thale cress | nucleus | 44.86 | 35.91 |
| Bra004222.1-P | Field mustard | nucleus | 42.98 | 34.22 |
| KRG97420 | Soybean | nucleus | 43.4 | 33.88 |
| CDY01805 | Canola | nucleus | 42.35 | 32.9 |
| CDX96096 | Canola | cytosol | 42.77 | 32.8 |
| CDY28889 | Canola | endoplasmic reticulum, extracellular | 37.32 | 32.54 |
Protein Annotations
| MapMan:13.3.6.1.4 | Gene3D:3.30.900.10 | UniProt:A0A1D6EST7 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | InterPro:HORMA_dom |
| InterPro:HORMA_dom_sf | InterPro:IPR003511 | InterPro:IPR036570 | ProteinID:ONM22771.1 | PFAM:PF02301 | PFscan:PS50815 |
| PANTHER:PTHR45173 | SUPFAM:SSF56019 | UniParc:UPI000843DE99 | EnsemblPlantsGene:Zm00001d006089 | EnsemblPlants:Zm00001d006089_P002 | EnsemblPlants:Zm00001d006089_T002 |
| SEG:seg | : | : | : | : | : |
Description
Shaggy kinase homolog
Coordinates
chr2:+:197838173..197852949
Molecular Weight (calculated)
53203.0 Da
IEP (calculated)
5.045
GRAVY (calculated)
-0.601
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRTLVSLMR TLDPMPEERT ILMKLLYYDD VTPEDYEPPF FKCCADNEAI SIWNKNPLKM EVGNVNSKHL VLALKVKSVL DPCDDDNVNS EGDGMTVDNE
101: SDHDDDFSDT EVHPPKADHY IIAPNGKHVL SNVCICCFGI INRSFLTEGK DKDQDTGTIS EDDTQDTAHE EELTSQVKEW ICSRDSGTIN VSDVLSNFPD
201: ISMELVEDIM DRLLKDGILS RASKDGYTVN QKADPKTPHI KKEAIMPDVS PTNVTKHNNG DLLYMKALYH ALPMDYVTIA KLQGKLDGEA SQNTVRKLID
301: KMVQDGYVKN SANRRLGKAV IHSESTNKRL LEIKKILEVN EGEKMAIDTN TEHPEPEHKD LLRVYEVGDG STMGCLHSIG SDLTRTRELP ELQQNVSMQS
401: GQEASTVGKD SSRTPTSVRE LAVPVCSLES GVLGKRIKRS LTGGNEMQST QDKRSRKASM VKEAILQHVK CQNPQAQ
101: SDHDDDFSDT EVHPPKADHY IIAPNGKHVL SNVCICCFGI INRSFLTEGK DKDQDTGTIS EDDTQDTAHE EELTSQVKEW ICSRDSGTIN VSDVLSNFPD
201: ISMELVEDIM DRLLKDGILS RASKDGYTVN QKADPKTPHI KKEAIMPDVS PTNVTKHNNG DLLYMKALYH ALPMDYVTIA KLQGKLDGEA SQNTVRKLID
301: KMVQDGYVKN SANRRLGKAV IHSESTNKRL LEIKKILEVN EGEKMAIDTN TEHPEPEHKD LLRVYEVGDG STMGCLHSIG SDLTRTRELP ELQQNVSMQS
401: GQEASTVGKD SSRTPTSVRE LAVPVCSLES GVLGKRIKRS LTGGNEMQST QDKRSRKASM VKEAILQHVK CQNPQAQ
001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
Arabidopsis Description
ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.