Factsheet for AT1G67370.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0010g03580.t01	Wine grape	cytosol	12.75	81.72
Bra004222.1-P	Field mustard	nucleus	79.03	78.63
CDY01805	Canola	nucleus	79.19	76.87
CDX96096	Canola	cytosol	79.36	76.05
CDY28889	Canola	endoplasmic reticulum, extracellular	64.6	70.38
Solyc04g007330.1.1	Tomato	nucleus	63.93	63.93
KRG97420	Soybean	nucleus	62.58	61.05
VIT_01s0010g03590.t01	Wine grape	nucleus	53.36	60.34
PGSC0003DMT400074843	Potato	cytosol	55.87	59.78
KRH31480	Soybean	nucleus	45.64	55.17
TraesCS5D01G294100.1	Wheat	nucleus	54.53	54.9
Os09t0506800-02	Rice	nucleus	56.04	54.75
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	57.89	54.68
TraesCS5B01G285800.1	Wheat	nucleus	46.31	51.3
TraesCS5A01G286500.1	Wheat	nucleus	45.81	51.03
OQU89747	Sorghum	plastid	54.7	50.54
Zm00001d006089_P002	Maize	nucleus	35.91	44.86
OQU89777	Sorghum	nucleus	38.76	32.54
EER89142	Sorghum	mitochondrion	13.09	18.31
Os12t0606600-01	Rice	nucleus	18.62	17.59
AT4G32200.1	Thale cress	nucleus	27.85	11.87

Protein Annotations

MapMan:13.3.6.1.4	Gene3D:3.30.900.10	EntrezGene:843058	ProteinID:AAG00246.1	ProteinID:AAG00247.1	ProteinID:AEE34638.1
EMBL:AF157556	Symbol:ASY1	ArrayExpress:AT1G67370	EnsemblPlantsGene:AT1G67370	RefSeq:AT1G67370	TAIR:AT1G67370
RefSeq:AT1G67370-TAIR-G	EnsemblPlants:AT1G67370.1	TAIR:AT1G67370.1	Unigene:At.14755	UniProt:F4HRV8	GO:GO:0000003
GO:GO:0000785	GO:GO:0000794	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005694	GO:GO:0006139
GO:GO:0006259	GO:GO:0007049	GO:GO:0007129	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0051026	GO:GO:0051321	InterPro:HORMA_dom	InterPro:HORMA_dom_sf	InterPro:IPR003511
InterPro:IPR007526	InterPro:IPR036570	RefSeq:NP_564896.1	PFAM:PF02301	PO:PO:0000037	PO:PO:0001078
PO:PO:0004507	PO:PO:0007611	PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009046
PO:PO:0020100	PFscan:PS50815	PFscan:PS50934	PANTHER:PTHR45173	SUPFAM:SSF46785	SUPFAM:SSF56019
InterPro:SWIRM	UniParc:UPI0000163252	InterPro:WH_DNA-bd_sf	SEG:seg	:	:

Description

ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]

Coordinates

chr1:-:25239117..25243837

Molecular Weight (calculated)

67214.5 Da

IEP (calculated)

4.771

GRAVY (calculated)

-0.661

Length

596 amino acids

Sequence
(BLAST)

001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.