Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G67370.1 | CDY34225 | AT3G22880.1 | 17937504 |
| AT1G67370.1 | CDY46610 | AT3G22880.1 | 17937504 |
| AT1G67370.1 | CDX80742 | AT4G29170.1 | 17937504 |
| AT1G67370.1 | CDY30231 | AT4G29170.1 | 17937504 |
| AT1G67370.1 | CDY47782 | AT4G29170.1 | 17937504 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004222.1-P | Field mustard | nucleus | 95.02 | 98.66 |
| CDY01805 | Canola | nucleus | 96.46 | 97.72 |
| VIT_01s0010g03580.t01 | Wine grape | cytosol | 11.9 | 79.57 |
| AT1G67370.1 | Thale cress | nucleus | 76.05 | 79.36 |
| CDY28889 | Canola | endoplasmic reticulum, extracellular | 69.45 | 78.98 |
| Solyc04g007330.1.1 | Tomato | nucleus | 59.0 | 61.58 |
| VIT_01s0010g03590.t01 | Wine grape | nucleus | 50.8 | 59.96 |
| KRG97420 | Soybean | nucleus | 57.88 | 58.92 |
| PGSC0003DMT400074843 | Potato | cytosol | 51.29 | 57.27 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 53.86 | 53.09 |
| Os09t0506800-02 | Rice | nucleus | 51.93 | 52.95 |
| TraesCS5D01G294100.1 | Wheat | nucleus | 50.32 | 52.87 |
| KRH31480 | Soybean | nucleus | 41.64 | 52.54 |
| TraesCS5B01G285800.1 | Wheat | nucleus | 42.93 | 49.63 |
| OQU89747 | Sorghum | plastid | 51.29 | 49.46 |
| TraesCS5A01G286500.1 | Wheat | nucleus | 42.12 | 48.97 |
| Zm00001d006089_P002 | Maize | nucleus | 32.8 | 42.77 |
| OQU89777 | Sorghum | nucleus | 36.66 | 32.11 |
| EER89142 | Sorghum | mitochondrion | 11.74 | 17.14 |
| Os12t0606600-01 | Rice | nucleus | 17.36 | 17.12 |
Protein Annotations
| EnsemblPlants:CDX96096 | EnsemblPlantsGene:GSBRNA2T00102142001 | Gene3D:3.30.900.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:HORMA_dom | InterPro:HORMA_dom_sf | InterPro:IPR003511 | InterPro:IPR007526 | InterPro:IPR036570 | InterPro:SWIRM |
| PANTHER:PTHR45173 | PFAM:PF02301 | PFscan:PS50815 | PFscan:PS50934 | ProteinID:CDX96096 | ProteinID:CDX96096.1 |
| SEG:seg | SUPFAM:SSF56019 | UniParc:UPI0004EDF27D | MapMan:13.3.6.1.4 | : | : |
Description
BnaA07g26350D
Coordinates
chrLK031892:+:997905..1002964
Molecular Weight (calculated)
70759.6 Da
IEP (calculated)
5.162
GRAVY (calculated)
-0.728
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLHSQLQI LKRKADHRFI LTWVMAQKLK EAEITEQDSL LLTRNLLRIA IFNISYIRGL FPENYFNDKS VPALDMKIKK LLPIDPESRR LIDWMEKGVY
101: DALQKKYLKT LMFCICESVE GPMIEEYSFN FSYSDSDSQD VRMNISRTGT KKHGGTFNST ADITQNQMRS SACKMVRTLV QLMRTLDKMP DKRTIVMKLM
201: YYDDITPPDY EPPFFRGCTE EEAQHVWTKD PLRMEVGNVN SKHLVLTLKV KSVLDPCADE NDDMQDDGKS TGPNSVHDEQ PSDSDSEISQ TKETQFLLAP
301: VEKQEDDDGE VDEDDTQDPV ESQQQLERVK DWINSRHLDT LELTDVLANF PDISIALTEE IMDQLEKEGV LSKTGKETYT INREKTPRSE FNFVKDEADG
401: KTASKDEKSI APEDYMYMKA LYHSLPMQYV TITKLHNMLD GEANQTKVRK LIDRMIQEGY VEDSSNRRLG KRVIHSVFTE NKLNEVRKVL ATNDDMDVDV
501: DETVNKTNGQ DAKLTPADVS TRGGIHSIGS DLTRTKGRSA MQQNGSVLSE QTISKANNTP MSSNAQPVAS RESFAVKGMA AKICTDAGTD SSQASQDRRY
601: RKTSTVRDPI LQYSKRQKSQ AN
101: DALQKKYLKT LMFCICESVE GPMIEEYSFN FSYSDSDSQD VRMNISRTGT KKHGGTFNST ADITQNQMRS SACKMVRTLV QLMRTLDKMP DKRTIVMKLM
201: YYDDITPPDY EPPFFRGCTE EEAQHVWTKD PLRMEVGNVN SKHLVLTLKV KSVLDPCADE NDDMQDDGKS TGPNSVHDEQ PSDSDSEISQ TKETQFLLAP
301: VEKQEDDDGE VDEDDTQDPV ESQQQLERVK DWINSRHLDT LELTDVLANF PDISIALTEE IMDQLEKEGV LSKTGKETYT INREKTPRSE FNFVKDEADG
401: KTASKDEKSI APEDYMYMKA LYHSLPMQYV TITKLHNMLD GEANQTKVRK LIDRMIQEGY VEDSSNRRLG KRVIHSVFTE NKLNEVRKVL ATNDDMDVDV
501: DETVNKTNGQ DAKLTPADVS TRGGIHSIGS DLTRTKGRSA MQQNGSVLSE QTISKANNTP MSSNAQPVAS RESFAVKGMA AKICTDAGTD SSQASQDRRY
601: RKTSTVRDPI LQYSKRQKSQ AN
001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
Arabidopsis Description
ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.