Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G67370.1 | OQU78622 | AT3G22880.1 | 17937504 |
| AT1G67370.1 | OQU84696 | AT3G22880.1 | 17937504 |
| AT1G67370.1 | EER98621 | AT4G29170.1 | 17937504 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89143 | Sorghum | nucleus | 9.15 | 65.0 |
| Os09t0506800-02 | Rice | nucleus | 46.34 | 53.93 |
| OQU89747 | Sorghum | plastid | 47.89 | 52.71 |
| TraesCS5A01G286500.1 | Wheat | nucleus | 38.87 | 51.59 |
| TraesCS5D01G294100.1 | Wheat | nucleus | 42.96 | 51.52 |
| TraesCS5B01G285800.1 | Wheat | nucleus | 38.73 | 51.12 |
| Solyc04g007330.1.1 | Tomato | nucleus | 34.08 | 40.6 |
| KRG97420 | Soybean | nucleus | 34.93 | 40.59 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 34.79 | 39.14 |
| AT1G67370.1 | Thale cress | nucleus | 32.54 | 38.76 |
| Bra004222.1-P | Field mustard | nucleus | 32.11 | 38.06 |
| PGSC0003DMT400074843 | Potato | cytosol | 29.3 | 37.34 |
| CDY01805 | Canola | nucleus | 31.97 | 36.97 |
| CDX96096 | Canola | cytosol | 32.11 | 36.66 |
| KRH31480 | Soybean | nucleus | 23.38 | 33.67 |
| CDY28889 | Canola | endoplasmic reticulum, extracellular | 25.77 | 33.46 |
| EER89142 | Sorghum | mitochondrion | 11.83 | 19.72 |
Protein Annotations
| EnsemblPlants:OQU89777 | EnsemblPlantsGene:SORBI_3002G265001 | Gene3D:3.30.900.10 | InterPro:HORMA_dom | InterPro:HORMA_dom_sf | InterPro:IPR003511 |
| InterPro:IPR036570 | PANTHER:PTHR45173 | PFAM:PF02301 | PFscan:PS50815 | ProteinID:OQU89777 | ProteinID:OQU89777.1 |
| SEG:seg | SUPFAM:SSF56019 | UniParc:UPI0009DC8CFB | UniProt:A0A1W0W5V4 | MapMan:13.3.6.1.4 | : |
Description
hypothetical protein
Coordinates
chr2:+:64938035..64944867
Molecular Weight (calculated)
81364.7 Da
IEP (calculated)
5.316
GRAVY (calculated)
-0.508
Length
710 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQESLILTR NLLQIAIYNI SYIRGLFHEK YFSDKPVPAL EMKIKKLMPM DAESRRLIDW MEKGVYDALQ RKYLKTLLFC ICEKEEGPMI EEYAFSFSYP
101: NTSTEEAVMN MSRTGSKKGS TTFTSNASEV TPDQMRSSAC KMIRTLVSLM RTLDPMPEER TILMKLLYYD DVTPEDYEPP FFKPCTYNKA IDTWEKNPLN
201: MERVNVNSKQ PGLALEGVLN HKDSNVNSGY VGMSVDKKPH QDDNFSETEV HPSEVDPPKD AAHEEELRAQ VKEWIYSRRE IRNLYVSDVL SNFPDIPVFS
301: VLYFLSKLQT CHDIMERLLK DGVLYRKSKH GPTINKEVIM YNVSATVTTK QNSGDSIYTK VLDHEVPTDD MTVARLEVNL DDANQATKIV HDGYVKNSAD
401: KILDKSAVHS ESTNRKLLKI KSILKGNEFK HMDIDTKREY SDTESKAVLV GSSVTSIQEL QEVHQNVSMQ SGQKTSETDN DPRTQLGAYD YSMESEMLVQ
501: KIKSSLIDAD QTECSKDLQR TVVGSILCIN PQPALHFWNL DSGASNHICG GYTWVKNKRK IPKEEQTKFY NAANKRVKFD EVGDILSKRL RLHNVYLSKD
601: LEELELYISI GQLTSNGYSV LISDEGNFTI HMAQNFNHIV GRGVLDRSRM AYMVTFLNDS VLECESTEIS KEDLMDEDKI DDEIKVSFCN FLLLFQVYNF
701: YHTYSLSIPD
101: NTSTEEAVMN MSRTGSKKGS TTFTSNASEV TPDQMRSSAC KMIRTLVSLM RTLDPMPEER TILMKLLYYD DVTPEDYEPP FFKPCTYNKA IDTWEKNPLN
201: MERVNVNSKQ PGLALEGVLN HKDSNVNSGY VGMSVDKKPH QDDNFSETEV HPSEVDPPKD AAHEEELRAQ VKEWIYSRRE IRNLYVSDVL SNFPDIPVFS
301: VLYFLSKLQT CHDIMERLLK DGVLYRKSKH GPTINKEVIM YNVSATVTTK QNSGDSIYTK VLDHEVPTDD MTVARLEVNL DDANQATKIV HDGYVKNSAD
401: KILDKSAVHS ESTNRKLLKI KSILKGNEFK HMDIDTKREY SDTESKAVLV GSSVTSIQEL QEVHQNVSMQ SGQKTSETDN DPRTQLGAYD YSMESEMLVQ
501: KIKSSLIDAD QTECSKDLQR TVVGSILCIN PQPALHFWNL DSGASNHICG GYTWVKNKRK IPKEEQTKFY NAANKRVKFD EVGDILSKRL RLHNVYLSKD
601: LEELELYISI GQLTSNGYSV LISDEGNFTI HMAQNFNHIV GRGVLDRSRM AYMVTFLNDS VLECESTEIS KEDLMDEDKI DDEIKVSFCN FLLLFQVYNF
701: YHTYSLSIPD
001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
Arabidopsis Description
ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.