Factsheet for Bra004222.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023796.1-P
Bra024159.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G67370.1	Bra023796.1-P	AT3G22880.1	17937504
AT1G67370.1	Bra024159.1-P	AT4G29170.1	17937504

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96096	Canola	cytosol	98.66	95.02
AT1G67370.1	Thale cress	nucleus	78.63	79.03
VIT_01s0010g03580.t01	Wine grape	cytosol	12.02	77.42
Solyc04g007330.1.1	Tomato	nucleus	61.1	61.41
VIT_01s0010g03590.t01	Wine grape	nucleus	52.25	59.39
KRG97420	Soybean	nucleus	59.77	58.59
PGSC0003DMT400074843	Potato	cytosol	53.42	57.45
Os09t0506800-02	Rice	nucleus	54.26	53.28
TraesCS5D01G294100.1	Wheat	nucleus	51.92	52.53
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	55.09	52.3
KRH31480	Soybean	nucleus	42.74	51.93
OQU89747	Sorghum	plastid	53.26	49.46
TraesCS5B01G285800.1	Wheat	nucleus	44.24	49.26
TraesCS5A01G286500.1	Wheat	nucleus	43.41	48.6
Zm00001d006089_P002	Maize	nucleus	34.22	42.98
OQU89777	Sorghum	nucleus	38.06	32.11
EER89142	Sorghum	mitochondrion	12.35	17.37
Os12t0606600-01	Rice	nucleus	18.03	17.12

Protein Annotations

MapMan:13.3.6.1.4	Gene3D:3.30.900.10	EnsemblPlantsGene:Bra004222	EnsemblPlants:Bra004222.1	EnsemblPlants:Bra004222.1-P	GO:GO:0000003
GO:GO:0000785	GO:GO:0000794	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005694	GO:GO:0006139
GO:GO:0006259	GO:GO:0007049	GO:GO:0007129	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0051026	InterPro:HORMA_dom	InterPro:HORMA_dom_sf	InterPro:IPR003511	InterPro:IPR007526
InterPro:IPR036570	UniProt:M4CJ38	PFAM:PF02301	PFscan:PS50815	PFscan:PS50934	PANTHER:PTHR45173
SUPFAM:SSF56019	InterPro:SWIRM	UniParc:UPI00025415EC	SEG:seg	:	:

Description

AT1G67370 (E=4e-265) ASY1, ATASY1 | ASY1 (ASYNAPTIC 1); DNA binding

Coordinates

chrA07:-:17518774..17523121

Molecular Weight (calculated)

68091.3 Da

IEP (calculated)

4.904

GRAVY (calculated)

-0.736

Length

599 amino acids

Sequence
(BLAST)

001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP ENYFNDKSVP ALDMKIKKLL PIDPESRRLI DWMEKGVYDA LQKKYLKTLM FCICESVEGP
101: MIEEYSFNFS YSDSDSQDVR MNISRTGTKK HGGTFHSTAD ITQNQMRSSA CKMVRTLVQL MRTLDKMPDK RTIVMKLMYY DDVTPPDYEP PFFRGCTEEE
201: AQHVWTKDPL RMEVGNVNSK HLVLTLKVKS VLDPCADEND DMQDDGKSTE PNSVHDEQPS DSDSEISQAK ETQFLLAPVE KQEDDDGEVD EDDTQDPVES
301: QQQLERVKDW INSRHLDTLE VTDVLANFPD ISIALTEEIM DQLEKEGVLS KTGKETYIIN REKTPRSEFN FVKDEADGKT ASKDEKSIAP EDYMYMKALY
401: HSLPMQYVTI TKLHNMLDGE ANQTKVRKLI DRMIQEGYVE DSSNRRLGKR VIHSVFTENK LNEVRKVLAT NDDMDVDVEE TVNKTNGQDA KLTPDVSTRG
501: GIHSIGSDLT RTKGRSAMQQ NGSVLSEQTI SKANNTPMSS NAQPVASRES FAVKGMAAKI CTDAGTDSSQ ASQDRRYRKT STVRDPILQY SKRQKSQAN

Best Arabidopsis Sequence Match ( AT1G67370.1 )
(BLAST)

001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN

Arabidopsis Description

ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.