Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G285800.1 | Wheat | nucleus | 95.14 | 94.61 |
| TraesCS5D01G294100.1 | Wheat | nucleus | 95.7 | 86.49 |
| Os09t0506800-02 | Rice | nucleus | 80.93 | 70.98 |
| Zm00001d006089_P002 | Maize | nucleus | 57.94 | 64.99 |
| OQU89747 | Sorghum | plastid | 76.64 | 63.57 |
| PGSC0003DMT400074843 | Potato | cytosol | 53.83 | 51.71 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 59.63 | 50.55 |
| Solyc04g007330.1.1 | Tomato | nucleus | 51.96 | 46.64 |
| KRH31480 | Soybean | nucleus | 42.62 | 46.25 |
| AT1G67370.1 | Thale cress | nucleus | 51.03 | 45.81 |
| KRG97420 | Soybean | nucleus | 51.59 | 45.17 |
| Bra004222.1-P | Field mustard | nucleus | 48.6 | 43.41 |
| CDY01805 | Canola | nucleus | 48.78 | 42.51 |
| CDX96096 | Canola | cytosol | 48.97 | 42.12 |
| OQU89777 | Sorghum | nucleus | 51.59 | 38.87 |
| CDY28889 | Canola | endoplasmic reticulum, extracellular | 39.25 | 38.39 |
| TraesCS5A01G304300.1 | Wheat | cytosol, mitochondrion | 28.79 | 20.34 |
Protein Annotations
| MapMan:13.3.6.1.4 | Gene3D:3.30.900.10 | GO:GO:0000003 | GO:GO:0000228 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007049 | GO:GO:0007129 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009554 | GO:GO:0009556 | GO:GO:0009987 | GO:GO:0016043 | InterPro:HORMA_dom | InterPro:HORMA_dom_sf |
| InterPro:IPR003511 | InterPro:IPR036570 | PFAM:PF02301 | PFscan:PS50815 | PANTHER:PTHR45173 | SUPFAM:SSF56019 |
| EnsemblPlantsGene:TraesCS5A01G286500 | EnsemblPlants:TraesCS5A01G286500.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:494381792..494386262
Molecular Weight (calculated)
60196.3 Da
IEP (calculated)
5.123
GRAVY (calculated)
-0.750
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIKKLMPMD AESRRLIDWM EKGVYDALQK KYLKTLLFCI CEKEEGPMIE EYAFSFSYPN TNGEEVAMNM SRTGSKKNSA TFKSNAAEVT PDQMRSSACK
101: MIRTLVSLMR TLDQMPEERT ILMKLLYYDD ATPEDYEPPF FKGCAENEAV NIWNKNPLKM EVGNVNSKHL VLALKVKSVL DPCDANDANS DDDKMSVGHE
201: SDQDDFTDTE VHPSEVDRYV IAPNDGNGKG QSGTNSDDET QDAAHEEELT AQVRAWICSR NMGTVNASDV LSNYPDISLE MVEDILERLL KDGLLSRAGK
301: DGYAVNKITD PKTPYIKEEV AMHNVSPTEG TKNNSGDLMY MKALYHALPM DYVTIAKLQG KLDGEANQST VRKLMDKMVQ DGYIKNSGNR RLGKAVIHSE
401: VTNRKLLEIK KILEVDITED MAIDTNARPA EFDRRDHQTA DQEMKDGSTN GRFQSVGSDL TRTRELPEQQ QTNKDPSRTP TSNRESATSL ESGVLGQRIR
501: KSLAGEESMC MPDKRTRKAS MVKEPILQQV KRQKS
101: MIRTLVSLMR TLDQMPEERT ILMKLLYYDD ATPEDYEPPF FKGCAENEAV NIWNKNPLKM EVGNVNSKHL VLALKVKSVL DPCDANDANS DDDKMSVGHE
201: SDQDDFTDTE VHPSEVDRYV IAPNDGNGKG QSGTNSDDET QDAAHEEELT AQVRAWICSR NMGTVNASDV LSNYPDISLE MVEDILERLL KDGLLSRAGK
301: DGYAVNKITD PKTPYIKEEV AMHNVSPTEG TKNNSGDLMY MKALYHALPM DYVTIAKLQG KLDGEANQST VRKLMDKMVQ DGYIKNSGNR RLGKAVIHSE
401: VTNRKLLEIK KILEVDITED MAIDTNARPA EFDRRDHQTA DQEMKDGSTN GRFQSVGSDL TRTRELPEQQ QTNKDPSRTP TSNRESATSL ESGVLGQRIR
501: KSLAGEESMC MPDKRTRKAS MVKEPILQQV KRQKS
001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
Arabidopsis Description
ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.