Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G67370.1 | KRG91377 | AT3G22880.1 | 17937504 |
| AT1G67370.1 | KRH35438 | AT3G22880.1 | 17937504 |
| AT1G67370.1 | KRH74183 | AT4G29170.1 | 17937504 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97420 | Soybean | nucleus | 90.67 | 73.16 |
| VIT_01s0010g03590.t01 | Wine grape | nucleus | 62.07 | 58.06 |
| PGSC0003DMT400074843 | Potato | cytosol | 57.0 | 50.45 |
| Solyc04g007330.1.1 | Tomato | nucleus | 57.61 | 47.65 |
| AT1G67370.1 | Thale cress | nucleus | 55.17 | 45.64 |
| TraesCS5B01G285800.1 | Wheat | nucleus | 46.86 | 42.94 |
| Bra004222.1-P | Field mustard | nucleus | 51.93 | 42.74 |
| TraesCS5A01G286500.1 | Wheat | nucleus | 46.25 | 42.62 |
| CDY01805 | Canola | nucleus | 52.54 | 42.18 |
| CDX96096 | Canola | cytosol | 52.54 | 41.64 |
| Zm00001d006089_P002 | Maize | nucleus | 39.76 | 41.09 |
| CDY28889 | Canola | endoplasmic reticulum, extracellular | 43.61 | 39.31 |
| TraesCS5D01G294100.1 | Wheat | nucleus | 46.65 | 38.85 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 49.7 | 38.83 |
| Os09t0506800-02 | Rice | nucleus | 47.67 | 38.52 |
| OQU89747 | Sorghum | plastid | 46.25 | 35.35 |
| OQU89777 | Sorghum | nucleus | 33.67 | 23.38 |
| EER89142 | Sorghum | mitochondrion | 16.84 | 19.48 |
| Os12t0606600-01 | Rice | nucleus | 20.08 | 15.69 |
| VIT_01s0010g03580.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02007145 | EnsemblPlants:KRH31480 | EnsemblPlantsGene:GLYMA_11G250400 | Gene3D:3.30.900.10 | InterPro:HORMA_dom | InterPro:HORMA_dom_sf |
| InterPro:IPR003511 | InterPro:IPR036570 | PANTHER:PTHR45173 | PFAM:PF02301 | PFscan:PS50815 | ProteinID:KRH31480 |
| ProteinID:KRH31480.1 | SUPFAM:SSF56019 | UniParc:UPI0006ED7E4C | UniProt:A0A0R0HVE9 | MapMan:13.3.6.1.4 | : |
Description
hypothetical protein
Coordinates
chr11:+:34209157..34213457
Molecular Weight (calculated)
55960.8 Da
IEP (calculated)
5.332
GRAVY (calculated)
-0.754
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEEYAFSFS YSDSDNQEVS MNINRTGNKK NRGTFKCNST TEVTPHQMRS SACKMIRTLV QLMRTLEKMP EERTIMMKLL YYDDVTPADY EPPFFKGCTD
101: EETYHPWEKN PLKMEVGNVN SKHFVLALKV KSVLDPCEDD NEGVQDDFSA GDDSMQQNEY YDTDSEVYLT QGNRYIVAPI DNTQDPVDDE QQLVRVKEWI
201: NCCHRDTIEF NDVLSNFPDI SVITDKLVEE GVLSKIGKET YAINKDKNLE YEFAIVKEEI DGQIPQVFDR ALQVEDRIYM KALYHVLPMT HVSVTKLQSL
301: LEGEVNQIAA RKILDKMVRD GIIEPKGSKR LGKRVIHSDL TERKFIEVQK ALSATTEAMD VDHCEPNSKS KKTGFRLNGS NYDVSTYGVL HSIGSDLTRM
401: KVTSETNYSD SGNGQKASKA KEPGNTPISR PVISRESFAQ GKENGRTNGI ANQGDEADTI ICSKSSQDKR PRKTSAAKEP IHQNMKRQRS EAQ
101: EETYHPWEKN PLKMEVGNVN SKHFVLALKV KSVLDPCEDD NEGVQDDFSA GDDSMQQNEY YDTDSEVYLT QGNRYIVAPI DNTQDPVDDE QQLVRVKEWI
201: NCCHRDTIEF NDVLSNFPDI SVITDKLVEE GVLSKIGKET YAINKDKNLE YEFAIVKEEI DGQIPQVFDR ALQVEDRIYM KALYHVLPMT HVSVTKLQSL
301: LEGEVNQIAA RKILDKMVRD GIIEPKGSKR LGKRVIHSDL TERKFIEVQK ALSATTEAMD VDHCEPNSKS KKTGFRLNGS NYDVSTYGVL HSIGSDLTRM
401: KVTSETNYSD SGNGQKASKA KEPGNTPISR PVISRESFAQ GKENGRTNGI ANQGDEADTI ICSKSSQDKR PRKTSAAKEP IHQNMKRQRS EAQ
001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
Arabidopsis Description
ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.