Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G67370.1 | KRG91377 | AT3G22880.1 | 17937504 |
| AT1G67370.1 | KRH35438 | AT3G22880.1 | 17937504 |
| AT1G67370.1 | KRH74183 | AT4G29170.1 | 17937504 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31480 | Soybean | nucleus | 73.16 | 90.67 |
| VIT_01s0010g03580.t01 | Wine grape | cytosol | 12.28 | 80.65 |
| Solyc04g007330.1.1 | Tomato | nucleus | 64.65 | 66.28 |
| AT1G67370.1 | Thale cress | nucleus | 61.05 | 62.58 |
| VIT_01s0010g03590.t01 | Wine grape | nucleus | 53.85 | 62.43 |
| PGSC0003DMT400074843 | Potato | cytosol | 55.48 | 60.86 |
| Bra004222.1-P | Field mustard | nucleus | 58.59 | 59.77 |
| CDY01805 | Canola | nucleus | 58.92 | 58.63 |
| CDX96096 | Canola | cytosol | 58.92 | 57.88 |
| Os09t0506800-02 | Rice | nucleus | 54.99 | 55.08 |
| TraesCS5D01G294100.1 | Wheat | nucleus | 53.36 | 55.07 |
| CDY28889 | Canola | endoplasmic reticulum, extracellular | 48.61 | 54.3 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 55.97 | 54.2 |
| TraesCS5B01G285800.1 | Wheat | nucleus | 45.66 | 51.86 |
| TraesCS5A01G286500.1 | Wheat | nucleus | 45.17 | 51.59 |
| OQU89747 | Sorghum | plastid | 54.17 | 51.32 |
| Zm00001d006089_P002 | Maize | nucleus | 33.88 | 43.4 |
| OQU89777 | Sorghum | nucleus | 40.59 | 34.93 |
| EER89142 | Sorghum | mitochondrion | 14.08 | 20.19 |
| Os12t0606600-01 | Rice | nucleus | 19.31 | 18.7 |
Protein Annotations
| EMBL:ACUP02010798 | EnsemblPlants:KRG97420 | EnsemblPlantsGene:GLYMA_18G006800 | EntrezGene:100792473 | Gene3D:3.30.900.10 | InterPro:HORMA_dom |
| InterPro:HORMA_dom_sf | InterPro:IPR003511 | InterPro:IPR036570 | PANTHER:PTHR45173 | PFAM:PF02301 | PFscan:PS50815 |
| ProteinID:KRG97420 | ProteinID:KRG97420.1 | SUPFAM:SSF56019 | UniParc:UPI0002959117 | UniProt:K7MP87 | MapMan:13.3.6.1.4 |
Description
hypothetical protein
Coordinates
chr18:-:495989..502111
Molecular Weight (calculated)
69763.8 Da
IEP (calculated)
5.075
GRAVY (calculated)
-0.677
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVAQKVKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALEMKIKKLM PVDAESRRLI DWMEKGVYDA LQKKYLKTLL FCVCEAVDGP
101: MIEEYAFSFS YSNSDNQEVS MNINRTGSKK NRGTFKYNST TEITPQQMRS SACKMIRTLV QLMRTLEKMP EERTILMKLL YYDDVTPADY EPPFFKGCTD
201: EEAYHPWEKN PLKMEVGNVN SKHFVLALKV KSVLDPCEDD NEGIQDDLSA GDDSMQHNEY YDTDSEVDLT QGNRYIVAPI HKEQEQEENG MIDEDNTQDP
301: VEDEQQLVRV KEWINCCHRD TIELNDVLSN FPDISVVLTE EIMEKLVEEG VLSKTGKETY AINKDKKLEY EFPVVKEEID GQIPQAFDRG LQFEDRIYMK
401: ALYHVLPMTH VSLTKLQSLL EGEVNQTAGR KILDKMVRDG FVEPKGSKRL GKRVIHSELT ERKFIEVQKA LSATEAMDVD HCEPNSKFKK TGFHLNGSNY
501: DVSTCGVLHS IGSDLTRMKV TSETNYSDSG SGQKTIKAKE PGNTPISRPV ISRESFAQGK ENGRTNGIEN QGDEADTIIC SKSSQDKRPR KTSAVKEPIN
601: QNMKRQRSEA Q
101: MIEEYAFSFS YSNSDNQEVS MNINRTGSKK NRGTFKYNST TEITPQQMRS SACKMIRTLV QLMRTLEKMP EERTILMKLL YYDDVTPADY EPPFFKGCTD
201: EEAYHPWEKN PLKMEVGNVN SKHFVLALKV KSVLDPCEDD NEGIQDDLSA GDDSMQHNEY YDTDSEVDLT QGNRYIVAPI HKEQEQEENG MIDEDNTQDP
301: VEDEQQLVRV KEWINCCHRD TIELNDVLSN FPDISVVLTE EIMEKLVEEG VLSKTGKETY AINKDKKLEY EFPVVKEEID GQIPQAFDRG LQFEDRIYMK
401: ALYHVLPMTH VSLTKLQSLL EGEVNQTAGR KILDKMVRDG FVEPKGSKRL GKRVIHSELT ERKFIEVQKA LSATEAMDVD HCEPNSKFKK TGFHLNGSNY
501: DVSTCGVLHS IGSDLTRMKV TSETNYSDSG SGQKTIKAKE PGNTPISRPV ISRESFAQGK ENGRTNGIEN QGDEADTIIC SKSSQDKRPR KTSAVKEPIN
601: QNMKRQRSEA Q
001: MVMAQKLKEA EITEQDSLLL TRNLLRIAIF NISYIRGLFP EKYFNDKSVP ALDMKIKKLM PMDAESRRLI DWMEKGVYDA LQRKYLKTLM FSICETVDGP
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
101: MIEEYSFSFS YSDSDSQDVM MNINRTGNKK NGGIFNSTAD ITPNQMRSSA CKMVRTLVQL MRTLDKMPDE RTIVMKLLYY DDVTPPDYEP PFFRGCTEDE
201: AQYVWTKNPL RMEIGNVNSK HLVLTLKVKS VLDPCEDEND DMQDDGKSIG PDSVHDDQPS DSDSEISQTQ ENQFIVAPVE KQDDDDGEVD EDDNTQDPAE
301: NEQQLARVKD WINSRHLDTL ELTDILANFP DISIVLSEEI MDQLVTEGVL SKTGKDMYIK KRDKTPESEF TFVKEEADGQ ISPGKSVAPE DYLYMKALYH
401: SLPMKYVTIT KLHNMLDGEA NQTAVRKLMD RMTQEGYVEA SSNRRLGKRV IHSSLTEKKL NEVRKVLATD DMDVDVTETI NKTNGPDAKV TADVSTCGGI
501: HSIGSDFTRT KGRSGGMQQN GSVLSEQTIS KAGNTPISNK AQPAASRESF AVHGGAVKEA ETVNCSQASQ DRRGRKTSMV REPILQYSKR QKSQAN
Arabidopsis Description
ASY1Meiosis-specific protein ASY1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRV8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.