Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400032105 | Potato | nucleus | 100.0 | 100.0 |
| VIT_02s0025g00250.t01 | Wine grape | nucleus | 56.19 | 59.0 |
| KRH41229 | Soybean | nucleus | 46.67 | 56.32 |
| KRH59959 | Soybean | nucleus | 45.71 | 55.17 |
| AT4G23496.1 | Thale cress | nucleus | 51.43 | 54.55 |
| Bra020817.1-P | Field mustard | nucleus | 50.48 | 53.54 |
| CDY68263 | Canola | nucleus | 50.48 | 53.54 |
| KRH27899 | Soybean | nucleus | 50.48 | 53.54 |
| KRH77582 | Soybean | nucleus | 48.57 | 53.12 |
| CDY65232 | Canola | nucleus | 49.52 | 52.53 |
| GSMUA_Achr11P... | Banana | nucleus | 47.62 | 49.02 |
| CDY63421 | Canola | nucleus | 45.71 | 48.48 |
| Solyc01g010270.2.1 | Tomato | nucleus | 43.81 | 44.23 |
| Solyc05g012160.2.1 | Tomato | cytosol | 43.81 | 41.07 |
| Solyc03g114970.2.1 | Tomato | nucleus | 40.0 | 37.84 |
Protein Annotations
| EnsemblPlants:Solyc08g081470.2.1 | EnsemblPlantsGene:Solyc08g081470.2 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF2 | SEG:seg | UniParc:UPI000276C0D4 |
| UniProt:K4CPE4 | MapMan:20.1.5.1.3 | : | : | : | : |
Description
Protein SPIRAL1-like 5 [Source:Projected from Arabidopsis thaliana (AT4G23496) UniProtKB/Swiss-Prot;Acc:Q8LGD1]
Coordinates
chr8:+:64519414..64521182
Molecular Weight (calculated)
11156.7 Da
IEP (calculated)
4.923
GRAVY (calculated)
-0.919
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSPNSSRG VSYGGGQSSL GYLFGDDKKQ QKIDEPPPSP TILAPPYGID DDTNYSQNNS NTTSITYQRS QGQNSGIFIT GRPSTKVNSV PGGDSSLGYL
101: FGDKS
101: FGDKS
1: MSRGGSFGGG QSSLGYLFGS DNEIPKTPAP PVAPKPAPPY GVDSTEEDHE ADQKPKISNN NYQRVQGQNS GNFVTDRPTT KVKSVPGGGS SLGYLFGDK
Arabidopsis Description
SP1L5Protein SPIRAL1-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.