Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400092079 | Potato | nucleus | 65.95 | 70.77 |
| Solyc03g026190.2.1 | Tomato | plastid | 17.53 | 24.65 |
| Solyc06g059750.2.1 | Tomato | nucleus, plastid | 23.2 | 21.96 |
| Solyc06g059760.2.1 | Tomato | nucleus, plastid | 23.83 | 21.05 |
Protein Annotations
| EnsemblPlants:Solyc11g005990.1.1 | EnsemblPlantsGene:Solyc11g005990.1 | InterPro:LIM-bd/SEUSS | PANTHER:PTHR10378 | PANTHER:PTHR10378:SF12 | PFAM:PF01803 |
| SEG:seg | UniParc:UPI0002769C23 | UniProt:K4D4L2 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr11:-:791164..796086
Molecular Weight (calculated)
89350.1 Da
IEP (calculated)
8.580
GRAVY (calculated)
-0.508
Length
793 amino acids
Sequence
(BLAST)
(BLAST)
001: MANDKILLSP SAPLPEERNV VTQPQNVPKP RHRPMKFKQI QDSSVSEKQF HSGNMISFGQ SDPQGLFGSS GVGLLDKDTA MSRPAPNMLL LSDQPITTNK
101: EASAVIIKQE PFVAPLIPEY TFRNEKKKLL EDAFAPSFSL MKLAYQQGML SSPRLRDQEN AKILEALDKE RSMYRPGQNV VQSLEHQIAK NKECLVPPKI
201: LEESLRKGKQ KLIEESLPPT FPQMNVASQL PSVSLMNGPC PSRASQINLM LLLQKQMQLS RTYEKLPAVV PDVRSIYTPE MCAQRLKLYM YRKQQRPRDN
301: NLEFWVNLVA EFFAPNGKER VCFSSNECRE LIGCIFPKDK WCCGICNVRP TAGFETSAEV LPRLWKNKYD TGMLDELLYM DKPEERYTLC GHIVLNYPKV
401: TEHTVYETGR VVREGRLRIV FSSDLKIRVW ELCCSAHEIY VGRKSVAPQV HQLKEATQKY QVFAESSSRI SPEEFQRTTN ELAPTVRELA RTLDKSLIND
501: LGYPKRHVRC LQISEIVSSM KDLMDYSKKY RVGPREAMDR IHRESAAVRV AQNSVAERMA QQHIDDVISQ HSSVISFAPY PSTDEGTRSL NCSSPHATSP
601: TSSTASSKRL VHQADLFEPK RKKQMTNSGE NSVLRAPTKP MLNQLIPTKT HPSSSIRPPI VQPSVIVPSS TMSIQPNEYV SSMVKVEQDL VTSQNLAVAA
701: ADASIGSKLV VDQNENIGKY FYGFETDGTV GKGYYMDQLE NLNRASLFHG IHIGSPSTGT SMGNDTHSNN QQINDQLPYL NGKMDPIDDI QFE
101: EASAVIIKQE PFVAPLIPEY TFRNEKKKLL EDAFAPSFSL MKLAYQQGML SSPRLRDQEN AKILEALDKE RSMYRPGQNV VQSLEHQIAK NKECLVPPKI
201: LEESLRKGKQ KLIEESLPPT FPQMNVASQL PSVSLMNGPC PSRASQINLM LLLQKQMQLS RTYEKLPAVV PDVRSIYTPE MCAQRLKLYM YRKQQRPRDN
301: NLEFWVNLVA EFFAPNGKER VCFSSNECRE LIGCIFPKDK WCCGICNVRP TAGFETSAEV LPRLWKNKYD TGMLDELLYM DKPEERYTLC GHIVLNYPKV
401: TEHTVYETGR VVREGRLRIV FSSDLKIRVW ELCCSAHEIY VGRKSVAPQV HQLKEATQKY QVFAESSSRI SPEEFQRTTN ELAPTVRELA RTLDKSLIND
501: LGYPKRHVRC LQISEIVSSM KDLMDYSKKY RVGPREAMDR IHRESAAVRV AQNSVAERMA QQHIDDVISQ HSSVISFAPY PSTDEGTRSL NCSSPHATSP
601: TSSTASSKRL VHQADLFEPK RKKQMTNSGE NSVLRAPTKP MLNQLIPTKT HPSSSIRPPI VQPSVIVPSS TMSIQPNEYV SSMVKVEQDL VTSQNLAVAA
701: ADASIGSKLV VDQNENIGKY FYGFETDGTV GKGYYMDQLE NLNRASLFHG IHIGSPSTGT SMGNDTHSNN QQINDQLPYL NGKMDPIDDI QFE
001: MVPSEPPNPV GGGENVPPSI LGGQGGAPLP SQPAFPSLVS PRTQFGNNMS MSMLGNAPNI SSLLNNQSFV NGIPGSMISM DTSGAESDPM SNVGFSGLSS
101: FNASSMVSPR SSGQVQGQQF SNVSANQLLA EQQRNKKMET QSFQHGQQQS MQQQFSTVRG GGLAGVGPVK MEPGQVSNDQ QHGQVQQQQQ KMLRNLGSVK
201: LEPQQIQAMR NLAQVKMEPQ HSEQSLFLQQ QQRQQQQQQQ QQFLQMPGQS PQAQMNIFQQ QRLMQLQQQQ LLKSMPQQRP QLPQQFQQQN LPLRPPLKPV
301: YEPGMGAQRL TQYMYRQQHR PEDNNIEFWR KFVAEYFAPN AKKRWCVSMY GSGRQTTGVF PQDVWHCEIC NRKPGRGFEA TAEVLPRLFK IKYESGTLEE
401: LLYVDMPRES QNSSGQIVLE YAKATQESVF EHLRVVRDGQ LRIVFSPDLK IFSWEFCARR HEELIPRRLL IPQVSQLGSA AQKYQQAAQN ATTDSALPEL
501: QNNCNMFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSRETRTGPI ESLAKFPRRT GPSSALPGPS PQQASDQLRQ QQQQQQQQQQ
601: QQQQQQQQQQ QQQTVSQNTN SDQSSRQVAL MQGNPSNGVN YAFNAASAST STSSIAGLIH QNSMKGRHQN AAYNPPNSPY GGNSVQMQSP SSSGTMVPSS
701: SQQQHNLPTF QSPTSSSNNN NPSQNGIPSV NHMGSTNSPA MQQAGEVDGN ESSSVQKILN EILMNNQAHN NSSGGSMVGH GSFGNDGKGQ ANVNSSGVLL
801: MNGQVNNNNN TNIGGAGGFG GGIGQSMAAN GINNINGNNS LMNGRVGMMV RDPNGQQDLG NQLLGAVNGF NNFDWNA
101: FNASSMVSPR SSGQVQGQQF SNVSANQLLA EQQRNKKMET QSFQHGQQQS MQQQFSTVRG GGLAGVGPVK MEPGQVSNDQ QHGQVQQQQQ KMLRNLGSVK
201: LEPQQIQAMR NLAQVKMEPQ HSEQSLFLQQ QQRQQQQQQQ QQFLQMPGQS PQAQMNIFQQ QRLMQLQQQQ LLKSMPQQRP QLPQQFQQQN LPLRPPLKPV
301: YEPGMGAQRL TQYMYRQQHR PEDNNIEFWR KFVAEYFAPN AKKRWCVSMY GSGRQTTGVF PQDVWHCEIC NRKPGRGFEA TAEVLPRLFK IKYESGTLEE
401: LLYVDMPRES QNSSGQIVLE YAKATQESVF EHLRVVRDGQ LRIVFSPDLK IFSWEFCARR HEELIPRRLL IPQVSQLGSA AQKYQQAAQN ATTDSALPEL
501: QNNCNMFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSRETRTGPI ESLAKFPRRT GPSSALPGPS PQQASDQLRQ QQQQQQQQQQ
601: QQQQQQQQQQ QQQTVSQNTN SDQSSRQVAL MQGNPSNGVN YAFNAASAST STSSIAGLIH QNSMKGRHQN AAYNPPNSPY GGNSVQMQSP SSSGTMVPSS
701: SQQQHNLPTF QSPTSSSNNN NPSQNGIPSV NHMGSTNSPA MQQAGEVDGN ESSSVQKILN EILMNNQAHN NSSGGSMVGH GSFGNDGKGQ ANVNSSGVLL
801: MNGQVNNNNN TNIGGAGGFG GGIGQSMAAN GINNINGNNS LMNGRVGMMV RDPNGQQDLG NQLLGAVNGF NNFDWNA
Arabidopsis Description
SEUTranscriptional corepressor SEUSS [Source:UniProtKB/Swiss-Prot;Acc:Q8W234]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.