Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 4
- vacuole 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G156600.1 | Wheat | cytosol | 60.0 | 3.66 |
| AT2G27120.2 | Thale cress | nucleus | 52.8 | 3.08 |
| Bra018641.1-P | Field mustard | nucleus | 52.0 | 3.05 |
| CDX95079 | Canola | nucleus | 52.0 | 3.04 |
| AT1G08260.1 | Thale cress | nucleus | 52.0 | 3.01 |
| CDX93579 | Canola | nucleus | 52.0 | 3.0 |
| Zm00001d043321_P001 | Maize | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0003887 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006260 | GO:GO:0006281 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008622 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 |
| InterPro:POL2 | PANTHER:PTHR10670 | EnsemblPlantsGene:TraesCS1B01G417700 | EnsemblPlants:TraesCS1B01G417700.1 | : | : |
Description
No Description!
Coordinates
chr1B:-:642048531..642049186
Molecular Weight (calculated)
13766.8 Da
IEP (calculated)
7.950
GRAVY (calculated)
0.216
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MHYNLTIFVC CRIKELISLT VLLGFIRQSS TMSKSLVHYG EQKSCAVTTA KRLAEFLGDS MVKDKGLHCQ YIVAPESEAT LVTAVPVAVF ETDTEIAKFI
101: YENGAKSPRK QISDLFLIGL TTSSA
101: YENGAKSPRK QISDLFLIGL TTSSA
0001: MSGRRCDRRL NVQKVSAADE LETKLGFGLF SQGETRLGWL LTFASSSWED ADTGKTFSCV DLFFVTQDGS SFKTKYKFRP YLYAATKDNM ELEVEAYLRR
0101: RYERQVADIQ IVHKEDLYLK NHLSGLQKKY LKVSFDTVQQ LVEVKRDLLH IVERNLAKFN ALEAYESILS GKREQRPQDC LDSVVDLREY DVPYHVRFAI
0201: DNDVRSGQWY NVSISSTDVI LEKRTDLLQR AEVRVCAFDI ETVKLPLKFP DAEYDQIMMI SYMVDGQGFL ITNRECVGKD IEDLEYTPKP EFEGYFKVTN
0301: VTNEVELLRK WFSHMQELKP GIYVTYNGDF FDWPFIERRA SHHGIKMNEE LGFRCDQNQG ECRAKFVCHL DCFSWVKRDS YLPQGSQGLK AVTKVKLGYD
0401: PLEVNPEDMV RFAMEKPQTM ASYSVSDAVA TYYLYMTYVH PFVFSLATII PMVPDEVLRK GSGTLCEMLL MVEAYKANVV CPNKNQADPE KFYQGKLLES
0501: ETYIGGHVEC LQSGVFRSDI PTSFKLDASA YQQLIDNLGR DLEYAITVEG KMRMDSVSNF DEVKEVIREK LEKLRDDPIR EEGPLIYHLD VAAMYPNIIL
0601: TNRLQPPSIV TDEVCTACDF NGPEKTCLRK LEWVWRGVTF KGNKSEYYHL KKQIESESVD AGANMQSSKP FLDLPKVEQQ SKLKERLKKY CQKAYSRVLD
0701: KPITEVREAG ICMRENPFYV DTVRSFRDRR YEYKTLNKVW KGKLSEAKAS GNLIKIQEAH DMVVVYDSLQ LAHKCILNSF YGYVMRKGAR WYSMEMAGVV
0801: TYTGAKIIQN ARLLIERIGK PLELDTDGIW CALPGSFPEN FTFKTIDMKK FTISYPCVIL NVDVAKNNSN DQYQTLVDPV RKTYNSRSEC SIEFEVDGPY
0901: KAMIIPASKE EGILIKKRYA VFNHDGTIAE LKGFEMKRRG ELKLIKVFQA ELFDKFLHGS TLEECYSAVA AVANRWLDLL EGQGKDIADS ELLDYISESS
1001: TMSKSLADYG QQKSCAVTTA KRLADFLGDT MVKDKGLRCQ YIVAREPEGT PVSERAVPVA IFQTDDPEKK FYLQKWCKIS SYTGIRSIID WMYYKQRLHS
1101: AIQKVITIPA AMQKVANPVL RVRHPYWLEK KVCDKFRQGK IVDMFSSANK DHSTTQDNVV ADIEEFCKEN RPSVKGPKPV ARSFEVDRNH SEGKQQESWD
1201: PEFHDISLQN VDKNVDYQGW LELEKRKWKM TLTNKKKRRF DDLKPCNQID AHKINKKVCK GRVGVGSYFR RPEEALTSSY LQIIQLVQSP QSGQFFAWVV
1301: VEGLMLKIPL TIPRVFYINS KASIAGNFTG KCINKILPHG KPCYNLMEVN IQEDQFIKES KKLAALLADP EIEGIYETKM PLEFSAICQI GCVCKIEDTA
1401: KHRNTQDGWK LGELHRITTT ECRYLENSIP LVYLYHSTST GRAVYVLYCH ASKLMSVVVV NPYGDKELLS SALERQFRDR CQELSPEPFS WDGILFQVEY
1501: VDHPEAATKF LQKALCEYRE ENCGATVAVI ECPDFNTTKE GVKALEDFPC VRIPFNDDDN SYQPVSWQRP AAKIAVLRCA SAIQWLDRRI AQSRYAHVPL
1601: GNFGRDWLTF TVDIFLSRAL RDQQQVLWVS DNGVPDLGDI NNEETFLADE TSLLFPGAYR KVSVELKVHR LAVNALLKSD LVSEMEGGGF LGVNSRGSSL
1701: NDNGSFDENN GCAQAFRVLK QLIKRLLHDA CNSGNIYADS ILQHLSWWLR SPSSKLHDPA LHLMLHKVMQ KVFALLLTDL RRLGAIIIYA DFSKVIIDTG
1801: KFDLSAAKTY CESLLTVMGS RDIFKLILLE PVHYWHSLLF MDQHNYAGIR ATGDEISGNE VTIEPKWSVA RHLPEYIQKD FIIIVATFIF GPWKFALEKK
1901: RGSAESLEAE MVEYLKEQIG TRFISMIVEK IGNIRSHIKD INVSDASWAS GQAPKGDYTF EFIQIITAVL ALDQNVQQDV LVMRKILLKY IKVKECAAEA
2001: EFIDPGPSFI LPNVACSNCG AYRDLDFCRD SALLTEKEWS CADPQCVKIY DKEQIESSII QMVRQRERMY QLQDLVCNRC NQVKAAHLTE QCECSGSFRC
2101: KESGSDFHKR IEIFLDIAKR QKFRLLEECI SWILFATSC
0101: RYERQVADIQ IVHKEDLYLK NHLSGLQKKY LKVSFDTVQQ LVEVKRDLLH IVERNLAKFN ALEAYESILS GKREQRPQDC LDSVVDLREY DVPYHVRFAI
0201: DNDVRSGQWY NVSISSTDVI LEKRTDLLQR AEVRVCAFDI ETVKLPLKFP DAEYDQIMMI SYMVDGQGFL ITNRECVGKD IEDLEYTPKP EFEGYFKVTN
0301: VTNEVELLRK WFSHMQELKP GIYVTYNGDF FDWPFIERRA SHHGIKMNEE LGFRCDQNQG ECRAKFVCHL DCFSWVKRDS YLPQGSQGLK AVTKVKLGYD
0401: PLEVNPEDMV RFAMEKPQTM ASYSVSDAVA TYYLYMTYVH PFVFSLATII PMVPDEVLRK GSGTLCEMLL MVEAYKANVV CPNKNQADPE KFYQGKLLES
0501: ETYIGGHVEC LQSGVFRSDI PTSFKLDASA YQQLIDNLGR DLEYAITVEG KMRMDSVSNF DEVKEVIREK LEKLRDDPIR EEGPLIYHLD VAAMYPNIIL
0601: TNRLQPPSIV TDEVCTACDF NGPEKTCLRK LEWVWRGVTF KGNKSEYYHL KKQIESESVD AGANMQSSKP FLDLPKVEQQ SKLKERLKKY CQKAYSRVLD
0701: KPITEVREAG ICMRENPFYV DTVRSFRDRR YEYKTLNKVW KGKLSEAKAS GNLIKIQEAH DMVVVYDSLQ LAHKCILNSF YGYVMRKGAR WYSMEMAGVV
0801: TYTGAKIIQN ARLLIERIGK PLELDTDGIW CALPGSFPEN FTFKTIDMKK FTISYPCVIL NVDVAKNNSN DQYQTLVDPV RKTYNSRSEC SIEFEVDGPY
0901: KAMIIPASKE EGILIKKRYA VFNHDGTIAE LKGFEMKRRG ELKLIKVFQA ELFDKFLHGS TLEECYSAVA AVANRWLDLL EGQGKDIADS ELLDYISESS
1001: TMSKSLADYG QQKSCAVTTA KRLADFLGDT MVKDKGLRCQ YIVAREPEGT PVSERAVPVA IFQTDDPEKK FYLQKWCKIS SYTGIRSIID WMYYKQRLHS
1101: AIQKVITIPA AMQKVANPVL RVRHPYWLEK KVCDKFRQGK IVDMFSSANK DHSTTQDNVV ADIEEFCKEN RPSVKGPKPV ARSFEVDRNH SEGKQQESWD
1201: PEFHDISLQN VDKNVDYQGW LELEKRKWKM TLTNKKKRRF DDLKPCNQID AHKINKKVCK GRVGVGSYFR RPEEALTSSY LQIIQLVQSP QSGQFFAWVV
1301: VEGLMLKIPL TIPRVFYINS KASIAGNFTG KCINKILPHG KPCYNLMEVN IQEDQFIKES KKLAALLADP EIEGIYETKM PLEFSAICQI GCVCKIEDTA
1401: KHRNTQDGWK LGELHRITTT ECRYLENSIP LVYLYHSTST GRAVYVLYCH ASKLMSVVVV NPYGDKELLS SALERQFRDR CQELSPEPFS WDGILFQVEY
1501: VDHPEAATKF LQKALCEYRE ENCGATVAVI ECPDFNTTKE GVKALEDFPC VRIPFNDDDN SYQPVSWQRP AAKIAVLRCA SAIQWLDRRI AQSRYAHVPL
1601: GNFGRDWLTF TVDIFLSRAL RDQQQVLWVS DNGVPDLGDI NNEETFLADE TSLLFPGAYR KVSVELKVHR LAVNALLKSD LVSEMEGGGF LGVNSRGSSL
1701: NDNGSFDENN GCAQAFRVLK QLIKRLLHDA CNSGNIYADS ILQHLSWWLR SPSSKLHDPA LHLMLHKVMQ KVFALLLTDL RRLGAIIIYA DFSKVIIDTG
1801: KFDLSAAKTY CESLLTVMGS RDIFKLILLE PVHYWHSLLF MDQHNYAGIR ATGDEISGNE VTIEPKWSVA RHLPEYIQKD FIIIVATFIF GPWKFALEKK
1901: RGSAESLEAE MVEYLKEQIG TRFISMIVEK IGNIRSHIKD INVSDASWAS GQAPKGDYTF EFIQIITAVL ALDQNVQQDV LVMRKILLKY IKVKECAAEA
2001: EFIDPGPSFI LPNVACSNCG AYRDLDFCRD SALLTEKEWS CADPQCVKIY DKEQIESSII QMVRQRERMY QLQDLVCNRC NQVKAAHLTE QCECSGSFRC
2101: KESGSDFHKR IEIFLDIAKR QKFRLLEECI SWILFATSC
Arabidopsis Description
POL2BDNA polymerase epsilon catalytic subunit [Source:TAIR;Acc:AT2G27120]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.