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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018641.1-P Field mustard nucleus 97.88 99.81
CDX95079 Canola nucleus 96.27 97.57
AT1G08260.1 Thale cress nucleus 87.33 87.69
KRH18030 Soybean mitochondrion, plastid 5.35 86.57
AT2G27120.2 Thale cress nucleus 82.12 83.23
Solyc11g067120.1.1 Tomato endoplasmic reticulum, plasma membrane 7.37 82.47
Solyc11g067130.1.1 Tomato nucleus 23.55 77.42
Solyc11g067110.1.1 Tomato nucleus 14.93 74.83
Os02t0511900-00 Rice nucleus 23.09 73.57
KRH25189 Soybean nucleus 69.59 68.36
KRH31260 Soybean cytosol, nucleus, plastid 68.57 67.54
OQU85005 Sorghum nucleus 63.36 65.57
KRG99612 Soybean cytosol 8.53 65.37
TraesCS1B01G156600.1 Wheat cytosol 61.01 64.68
TraesCS1D01G139000.1 Wheat cytosol 60.92 64.58
GSMUA_Achr9P17910_001 Banana nucleus 58.53 64.47
VIT_06s0061g01610.t01 Wine grape nucleus 71.11 64.26
HORVU1Hr1G036500.57 Barley mitochondrion, nucleus 64.52 64.13
TraesCS1A01G130700.1 Wheat nucleus 65.35 64.02
Zm00001d016581_P004 Maize nucleus 65.25 63.67
Zm00001d043321_P001 Maize nucleus 5.48 61.34
GSMUA_Achr9P17920_001 Banana nucleus 6.27 58.62
Solyc11g067140.1.1 Tomato mitochondrion, nucleus 22.58 52.58
Os02t0511901-00 Rice nucleus 17.7 52.1
TraesCS1B01G417700.1 Wheat endoplasmic reticulum, extracellular 3.0 52.0
Zm00001d041354_P001 Maize cytosol 7.93 51.04
Zm00001d042827_P001 Maize cytosol 7.93 51.04
Protein Annotations
KEGG:00230+2.7.7.7KEGG:00240+2.7.7.7Gene3D:1.10.132.60MapMan:13.2.3.3.1Gene3D:3.30.420.10GO:A0A078DYT6
EnsemblPlants:CDX93579ProteinID:CDX93579ProteinID:CDX93579.1ncoils:CoilInterPro:DNA-dir_DNA_pol_BInterPro:DNA-dir_DNA_pol_B_exonuc
InterPro:DNA-dir_DNA_pol_B_multi_domInterPro:DNA_pol_e_suA_CGO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003824GO:GO:0003887GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006259GO:GO:0006260GO:GO:0006281GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0008622GO:GO:0009058GO:GO:0009987
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00156259001InterPro:IPR036397PFAM:PF00136PFAM:PF03104PFAM:PF08490
InterPro:POL2PANTHER:PTHR10670InterPro:RNaseH-like_sfInterPro:RNaseH_sfSMART:SM00486SMART:SM01159
SUPFAM:SSF53098SUPFAM:SSF56672UniParc:UPI0004EEB841SEG:seg::
Description
BnaA06g04690D
Coordinates
chrLK031876:-:791877..807173
Molecular Weight (calculated)
249842.0 Da
IEP (calculated)
6.203
GRAVY (calculated)
-0.406
Length
2170 amino acids
Sequence
(BLAST)
0001: MSGDNRRWDR KDSRRSNTQK VVKTAEDELE SKLGFGLFSE GETRLGWLLT FASSSWEDPD TGKTYSCVDL YFVTQDGFYF KTKYKFRPYF YAATKEKMEL
0101: EVEAYLRRRY ERQVADIEIV EKEDLDLKNH LSGLRKKYLK VSFDTVQQLM EVKRDLSHVV ERNQAKFDAL EAYESILAGK REQRLQDCLD SLVDLREYDV
0201: PYHVRFAVDK DVRSGQWYNV SISSTDVTLE KRTDILQRAE VRVCAFDIET TKLELKFPDA EYDQIMMISY MVDGQGFLIV NRECVGEDIE DLEYTPKPEF
0301: EGYFKVTNVS NEVELLRKWF SHMQEVKPGI YVTYNGDFFD WPFIERRASH HEIKMNEELG FRCDHNQGEC RAKFVCHLDC FAWVKRDSYL PQGSHGLKAV
0401: TKAKLGYDPL EVNPEDMVQF AMEKPQTMAS YSVSDAVATY YLYMTYVHPF IFSLATIIPM VPDEVLRKGS GTLCEMLLMV EAYKANVVCP NKNQADPEKF
0501: YQSHLLESET YIGGHVECLE SGVFRSDIPT SFKLDTSAYQ ASNLLYFTQY DFSCCFLNIT SSDMQLIDNL DRDLEYAITV EGKMRMDSVS NYDEVKEKIK
0601: EKLEKLRDCP IREEGPLIYH LDVAAMYPNI ILTNRLQPPS IVTNEICTAC DFNRPGKTCL RKLEWVWRGV TYMAKKSDYY HLKKQIESEF VDAGANIQSS
0701: KSFLDLPKVE QQSKLKERLK KYCQKAYRRV LDKPITEILE AGICMRENPF YVDTVRSFRD RRYEYKTLNK VWKGKLSEAK ASGNSIKIQE AQDMVVVYDS
0801: LQLAHKCILN SFYGYVMRKG ARWYSMEMAG VVTYTGAKII QNARLLIERI GRPLELDTDG IWCALPGSFP ENFTFKTIDM KKFTISYPCV MLNVDVAKNN
0901: TNDQYQTLVD PVRKTYESHS ECSIEFEVDG PYKAMIIPAS KEEGVLLKKR YAVFNHDGTL AELKGFEIKR RGELKLIKVF QAELFDKFLH GSTLEECYSA
1001: VAAVANRWLD LLDNQGKDIA DSELLDYISE SSTMSKSLAD YGEQKSCAVT TAKRLADFLG DTMVKDKGLR CQYIVACEPK GSPVSERAVP VAIFTLSKTE
1101: PERMKFYLGK WCKQRLSSDH KVDIRLIIDW SYYKQRLSSA IQKVITIPAA MQKVANPVPR VLHPDWLHKK VREKDDKFRQ RKLADMFSSA NKDGVLDKNH
1201: SVAQDDMDDI EDFCKENKPG VKGPKPIARS YEVNKEQFGR EQQESKDPKC DDDISFENID KNVDYQGWLE VKKRKWKGIV EKKKKRRLGD QRSLKQIESH
1301: EIKKKVTQVR RGVGSFFRRP EEALTSSHWQ IIQLVPSPQS GQFFAWVVVE GLMLKIPLTI PRVEIQEEQF RKESKKLAAL LADPEIEGIY ETKVPLEFSA
1401: ICQIGCVCKI DNTAKHRNTQ DGWKVGELHM KTTTECRYLE RSIPLLYLYN STSTLRAIYV LYCHASKLMS AVVVNPYGDK ELLPSALERQ FRDGCQELSL
1501: ESLSWDGIVF QVDYVDHAEA AEKIIQKAIS EYREENSGPT VVVTECPDFN SIKDGIKALD DFPCVRIPFN GDDNSYQPVS WQRPAAKLAM FRCAAAFQWL
1601: DRRISQSRYA HVPLGNFGLD WLTFTVDIFL SRALRDQQQV LWVSDNGIPD LGGLNNEETF FADEVQQTSL VYPGAYRKIS VELKIHHLAV NALLKSNLVS
1701: EMEGGDFLGF EQDVNPRGSS SNVNASFDET TGCAQAFRVL KQLINSCLTD VCKSRNIYAD SILQRLSWWL CSPCSKLHDP ALHLMLHKVM QKVFALLLTD
1801: LRRLGATIIF ADFSKIVIDT GKFDLSAAKA YCDSLLTAVG NSDIFEWILL EPVHYWHSLL FMDQYNYAGI QATDDEISPD EVTIEPKWSV ARLFPEYIQR
1901: DFVIIVAKFI FDPWKFSLEK KRGSSESLEA QMVEYLKEQI PSSFFNMLVA KINDIVSHMK EIDVSDASRD SSQAPKRDYT LELIQTICAV MGLDQNVEQD
2001: VRVMKRNLLK YINVKEFAAE AEFLDPGPSF ILPNVACSNC DAYRDLDIGR DPALLTEKEW CCVDSQCGKI YDREQMENSL LQMVRQRERM YHMQDLVCTR
2101: CNQVKAAHLT EQCECSGSFR CKESGSEFLK RMEIFLDIAK RQKFKLLEEC TSWILDPTGS WQTNTGRHHS
Best Arabidopsis Sequence Match ( AT1G08260.1 )
(BLAST)
0001: MSGDNRRRDR KDTRWSKKPK VVNTAEDELE SKLGFGLFSE GETRLGWLLT FSSSSWEDRD TGKVYSCVDL YFVTQDGFSF KTKYKFRPYF YAATKDKMEL
0101: ELEAYLRRRY ERQVADIEIV EKEDLDLKNH LSGLQKKYLK ISFDTVQQLM EVKRDLLHIV ERNQAKFDAL EAYESILAGK REQRPQDCLD SIVDLREYDV
0201: PYHVRFAIDN DVRSGQWYNV SISSTDVILE KRTDLLQRAE VRVCAFDIET TKLPLKFPDA EYDQIMMISY MVDGQGFLII NRECVGEDVE DLEYTPKPEF
0301: EGYFKVTNVK NEVELLQRWF YHMQELKPGI YVTYNGDFFD WPFIERRASH HGIKMNEELG FRCDQNQGEC RAKFACHLDC FAWVKRDSYL PQGSHGLKAV
0401: TKAKLGYDPL EVNPEDMVRF AMEKPQTMAS YSVSDAVATY YLYMTYVNPF IFSLATIIPM VPDEVLRKGS GTLCEMLLMV EAYKANVVCP NKNQADPEKF
0501: YQNQLLESET YIGGHVECLE SGVFRSDIPT SFKLDSSAYQ QLIDNLGRDL EYAITVEGKM RMDSISNYDE VKDEIKEKLE KLRDDPIREE GPLIYHLDVA
0601: AMYPNIILTN RLQPPSIVTD EICTACDFNR PGKTCLRKLE WVWRGVTFMG KKSDYYHLKK QIESEFVDAG ANIMSSKSFL DLPKVDQQSK LKERLKKYCQ
0701: KAYKRVLDKP ITEVREAGIC MRENPFYVDT VRSFRDRRYE YKTLNKVWKG KLSEAKASGN SIKIQEAQDM VVVYDSLQLA HKCILNSFYG YVMRKGARWY
0801: SMEMAGVVTY TGAKIIQNAR LLIERIGKPL ELDTDGIWCC LPGSFPENFT FKTIDMKKLT ISYPCVMLNV DVAKNNTNDQ YQTLVDPVRK TYKSHSECSI
0901: EFEVDGPYKA MIIPASKEEG ILIKKRYAVF NHDGTLAELK GFEIKRRGEL KLIKVFQAEL FDKFLHGSTL EECYSAVAAV ADRWLDLLDN QGKDIADSEL
1001: LDYISESSTM SKSLADYGEQ KSCAVTTAKR LAEFLGVTMV KDKGLRCQYI VACEPKGTPV SERAVPVAIF TTNPEVMKFH LRKWCKTSSD VGIRLIIDWS
1101: YYKQRLSSAI QKVITIPAAM QKVANPVPRV LHPDWLHKKV REKDDKFRQR KLVDMFSSAN KDVVLDTDLP VTKDNVEDIE DFCKENRPSV KGPKPIARSY
1201: EVNKKQSECE QQESWDTEFH DISFQNIDKS VNYQGWLELK KRKWKVTLEK KKKRRLGDLR SSNQVDTHEI NQKVGQGRGG VGSYFRRPEE ALTSSHWQII
1301: QLVPSPQSGQ FFAWVVVEGL MLKIPLSIPR VFYINSKVPI DEYFQGKCVN KILPHGRPCY SLTEVKIQED QFKKESKKRA ALLADPGVEG IYETKVPLEF
1401: SAICQIGCVC KIDNKAKHRN TQDGWEVGEL HMKTTTECHY LKRSIPLVYL YNSTSTGRAI YVLYCHVSKL MSAVVVDPFN GNELLPSALE RQFRDSCLEL
1501: SLDSLSWDGI RFQVHYVDHP EAAKKIIQRA ISEYREENCG PTVAVIECPD FTFMKEGIKA LDDFPCVRIP FNDDDNSYQP VSWQRPAAKI AMFRCAAAFQ
1601: WLDRRITQSR YAHVPLGNFG LDWLTFTIDI FLSRALRDQQ QVLWVSDNGV PDLGGINNEE AFFADEVQQT SLVFPGAYRK VSVELKIHNL AVNALLKSNL
1701: VNEMEGGGFM GFEQDVNPRG INSNDNTSFD ETTGCAQAFR VLKQLIHSCL TDVRKSKNIY ADSILQRLSW WLCSPSSKLH DPALHLMLHK VMQKVFALLL
1801: TDLRRLGAII IYADFSKVII DTVKFDLSAA KAYCESLLST VRNSDIFEWI LLEPVHYWHS LLFMDQYNYA GIRADDEISL DEVTIEPKWS VARHLPEYIE
1901: RDFIIIIAKF IFDPWKFAIE NKKGSSESLE AQMIEYLREQ IGSTFINMLV KKVDDIMSHM KEINVSDASR VSGQAPKGDY SLEFIQVISA VLALDQNVQQ
2001: DVLVMRKSLL KYIKVKECAA EAEFLDPGPS FILPNVACSN CDAYRDLDIC RDPALLTEKE WSCADTQCGK IYDREQMESS LLEMVRQRER MYHMQDVVCI
2101: RCNQVKAAHL TEQCECSGSF RCKESGSEFS KRMEIFMDIA KRQKFRLLEE YISWIIYGPS Y
Arabidopsis Description
POL2ADNA polymerase epsilon catalytic subunit A [Source:UniProtKB/Swiss-Prot;Acc:F4HW04]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.