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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU85005 Sorghum nucleus 90.65 96.14
TraesCS1B01G156600.1 Wheat cytosol 80.44 87.4
TraesCS1D01G139000.1 Wheat cytosol 80.4 87.35
HORVU1Hr1G036500.57 Barley mitochondrion, nucleus 85.3 86.9
Os02t0511901-00 Rice nucleus 28.78 86.84
TraesCS1A01G130700.1 Wheat nucleus 86.47 86.82
Os02t0511900-00 Rice nucleus 25.9 84.58
Zm00001d015562_P001 Maize nucleus 4.09 83.49
GSMUA_Achr9P17910_001 Banana nucleus 65.24 73.65
Zm00001d043321_P001 Maize nucleus 5.85 67.01
AT1G08260.1 Thale cress nucleus 64.43 66.31
Bra018641.1-P Field mustard nucleus 63.17 66.02
CDX95079 Canola nucleus 63.08 65.53
CDX93579 Canola nucleus 63.67 65.25
AT2G27120.2 Thale cress nucleus 61.69 64.08
GSMUA_Achr9P17920_001 Banana nucleus 6.25 59.91
Zm00001d041354_P001 Maize cytosol 8.32 54.9
Zm00001d042827_P001 Maize cytosol 8.32 54.9
Protein Annotations
KEGG:00230+2.7.7.7KEGG:00240+2.7.7.7Gene3D:1.10.132.60EntrezGene:103627197MapMan:13.2.3.3.1Gene3D:3.30.420.10
UniProt:A0A1D6H8Z3ProteinID:AQK71194.1InterPro:DNA-dir_DNA_pol_BInterPro:DNA-dir_DNA_pol_B_exonucInterPro:DNA-dir_DNA_pol_B_multi_domInterPro:DNA_pol_e_suA_C
GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003824GO:GO:0003887
GO:GO:0004518GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006259GO:GO:0006260GO:GO:0006281GO:GO:0006950GO:GO:0008150
GO:GO:0008152GO:GO:0008270GO:GO:0008408GO:GO:0008622GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016787GO:GO:0071897GO:GO:0090305
InterPro:IPR036397PFAM:PF00136PFAM:PF03104PFAM:PF08490InterPro:POL2PANTHER:PTHR10670
InterPro:RNaseH-like_sfInterPro:RNaseH_sfSMART:SM00486SMART:SM01159SUPFAM:SSF53098SUPFAM:SSF56672
TMHMM:TMhelixUniParc:UPI000842BB03EnsemblPlantsGene:Zm00001d016581EnsemblPlants:Zm00001d016581_P004EnsemblPlants:Zm00001d016581_T004SEG:seg
Description
DNA polymerase epsilon catalytic subunit A
Coordinates
chr5:+:168223687..168255407
Molecular Weight (calculated)
253821.0 Da
IEP (calculated)
7.029
GRAVY (calculated)
-0.355
Length
2224 amino acids
Sequence
(BLAST)
0001: MSGRRGPAAT GGGRGGGGGG GGNWRRSGSA KAKEQRLRLG AEELLESRLG FAPYTDGERR LGWLLTFSPS SWEDEDTGKI YSCVDLYFVS QDGSTFKVKY
0101: KFRPYFYAAT KDKMELEVEA YIRRRYEGEI SDIEIIEKED LDLKNHLSGL KRKYLKLQFD TVQQLMRVRN DLLHVVEKNE EKIDAVEAFE SIHGVKRVER
0201: PQDYINYIID LREYDVPYHV RFAIDNDVRS GQWYNVNVSG SDVLLQRRED LLQRAEVHVC AFDIETTKLP LKFPDAEYDN CVGEDIDDLE YTPKPEFEGY
0301: FRVKNVQTEL DLLKAWFSHM QEVKPGIYVT YNGDFFDWPF LEKRAAHHGI KMNEEIGFQC DNNQGECRAK FSCHLDCFAW VKRDSYLPQG SQGLKAVTKA
0401: KLGYDPLEVN PEDMVRFAME QPQTMASYSV SDAVATYYLY MTYVHPFIFS LATIIPMSPD EVLRKGSGTL CEMLLMVQAF KASVICPNKH QADLEKFYNN
0501: RLLESETYIG GHVECLETGV FRSDLPTKFQ LEPLAYEQLI GNLDRDLHYV IAVEGKLDID SVTNYDEVKD AIEQKLVALR DHPIREERPL IYHLDVAAMY
0601: PNIILTNRLQ PPSIVTDVDC TACDFNRPGK NCLRKLEWVW RGETYMAKKN DYYHIKRQIE SELIQSGGIA SSKPFLDLSK PEHLLKLKDR LKKYCQKAHK
0701: RVVDKPITEV REAGICMREN SFYVDTVRSF RDRRYEYKGL NKTWKGKLAE AKASGNSMKI QEAQDMVVLY DSLQLAHKCI LNSFYGYVMR KGARWYSMEM
0801: AGVVTYTGAK IIQNARLLVE KIGRPLELDT DGIWCVLPGS FPENFTFKTK AGKKLTISYP CVMLNADVAR NNTNDQYQTL KDPVNKTYTT HSECSIEFEV
0901: DGPYKAMILP ASKEEGILIK KRYAVFNEDG TLAELKGFEI KRRGELKLIK VFQAEVFDKF LHGSTLEECY SAVASVANRW LDLLDNQGID IADSELLDFI
1001: SESSTMSKSL VDYGEQKSCA VTTAKRLAEF LGDSMVKDKG LHCQYIVARE PQGTPVSERA VPVAIFETDP EIAKHYLRKW FRFSSDANIR SIVDWSYYKQ
1101: RLSSAIQKII TIPAAMQKIS NPVPRVLHPD WLHKKVREKD DRFRQRKLRD IFSPLAKEEG LHNLNRTGDM EDLLISNKDL RKNPSHGLDI DKENNPNGAS
1201: VGSGLNISKK QQNCMTGLNV PCTSQIQNAA SYETVDKGTD YQGWLDAKKR KWKYVREQKK RRRLGAAATF DDPNALLSAR HANQLPVNSR NRSTFFQKQE
1301: LALFRSHWQA CVFCYLLCSV ALVYHLFFFA LLMIVNSIYC PHQIIQLASS TVPGHFFAWV VAEGIMFKIP INVPRTFYLN SKAPVTEEFP GRRVKKILPH
1401: GRPCFNLIEV VTTEEQFRAE GKKLAAHLAE PDVEGIYETK IPPELNAVLQ IGCVCKVDKS AKRRSIQDGW DLAELQMKTT AECSYLEQTF SFFYLYHSLS
1501: EGRAVYVFYF PTSFRIHAVI VNPFRNKEIS PSFLEKQFGD ACQALGSVPE NLSFHVDYQT SIDAGSKYAQ RMLLEYRQQH SGPVVGIIEC PKLQAIKVAI
1601: RALDDLPCVT IPSNARDNNY QALGWQATAG RTSMQRCAAS TQWFNERISL AKYAHVPLGN FELDWLLFTA DVFFSRALRD QQQVLWISDD GIPDLGGTYE
1701: GETCFADEVI QPALTYPGAY RRVSVELKIH HLAVNALLKS SQVDEMEGGS IGSFGNDVPP GSNATETDFD DASLCIPAFQ VLKQLIQRCI SDAVSSGNVF
1801: ADAILQHLYR WLCSPRSKLH DPALHRLLHN VMKKVFALLL AELRKLGANV IFANFSKIII DTGKVDLSSA HAYCDSLLRT LQTRDLFEWI ELEPLHFWHS
1901: LLFMDQYNYG GIQAKTQNVD SSDGDNDIDI VSSWNMAEDL PKDTQDHFVL IVSEFLYIPW KFMKEQVAAQ ATIRDDTSCT PSVTIMAAEN LEGQVIEHLR
2001: DKVTCFLRPD KLLRTVSDIL HHFKGKSKHE SDEPAKSDPH THKGDAALEF IKHICAVLAL DQNVQHDILR MRKNLLKLVR VKEFAPEAQF QDPCASFTLP
2101: NVICSYCNDC RDLDLCRDSA LQGQEWRCAV PQCGQPYHRE QMENALLQVV RQRERLYHLQ DLVCVRCRQV KAAHLSEQCS CGGSFRCKEE PSYFLSKMRV
2201: FLKVAVSQKF PLLQDCVQWI LEAR
Best Arabidopsis Sequence Match ( AT1G08260.1 )
(BLAST)
0001: MSGDNRRRDR KDTRWSKKPK VVNTAEDELE SKLGFGLFSE GETRLGWLLT FSSSSWEDRD TGKVYSCVDL YFVTQDGFSF KTKYKFRPYF YAATKDKMEL
0101: ELEAYLRRRY ERQVADIEIV EKEDLDLKNH LSGLQKKYLK ISFDTVQQLM EVKRDLLHIV ERNQAKFDAL EAYESILAGK REQRPQDCLD SIVDLREYDV
0201: PYHVRFAIDN DVRSGQWYNV SISSTDVILE KRTDLLQRAE VRVCAFDIET TKLPLKFPDA EYDQIMMISY MVDGQGFLII NRECVGEDVE DLEYTPKPEF
0301: EGYFKVTNVK NEVELLQRWF YHMQELKPGI YVTYNGDFFD WPFIERRASH HGIKMNEELG FRCDQNQGEC RAKFACHLDC FAWVKRDSYL PQGSHGLKAV
0401: TKAKLGYDPL EVNPEDMVRF AMEKPQTMAS YSVSDAVATY YLYMTYVNPF IFSLATIIPM VPDEVLRKGS GTLCEMLLMV EAYKANVVCP NKNQADPEKF
0501: YQNQLLESET YIGGHVECLE SGVFRSDIPT SFKLDSSAYQ QLIDNLGRDL EYAITVEGKM RMDSISNYDE VKDEIKEKLE KLRDDPIREE GPLIYHLDVA
0601: AMYPNIILTN RLQPPSIVTD EICTACDFNR PGKTCLRKLE WVWRGVTFMG KKSDYYHLKK QIESEFVDAG ANIMSSKSFL DLPKVDQQSK LKERLKKYCQ
0701: KAYKRVLDKP ITEVREAGIC MRENPFYVDT VRSFRDRRYE YKTLNKVWKG KLSEAKASGN SIKIQEAQDM VVVYDSLQLA HKCILNSFYG YVMRKGARWY
0801: SMEMAGVVTY TGAKIIQNAR LLIERIGKPL ELDTDGIWCC LPGSFPENFT FKTIDMKKLT ISYPCVMLNV DVAKNNTNDQ YQTLVDPVRK TYKSHSECSI
0901: EFEVDGPYKA MIIPASKEEG ILIKKRYAVF NHDGTLAELK GFEIKRRGEL KLIKVFQAEL FDKFLHGSTL EECYSAVAAV ADRWLDLLDN QGKDIADSEL
1001: LDYISESSTM SKSLADYGEQ KSCAVTTAKR LAEFLGVTMV KDKGLRCQYI VACEPKGTPV SERAVPVAIF TTNPEVMKFH LRKWCKTSSD VGIRLIIDWS
1101: YYKQRLSSAI QKVITIPAAM QKVANPVPRV LHPDWLHKKV REKDDKFRQR KLVDMFSSAN KDVVLDTDLP VTKDNVEDIE DFCKENRPSV KGPKPIARSY
1201: EVNKKQSECE QQESWDTEFH DISFQNIDKS VNYQGWLELK KRKWKVTLEK KKKRRLGDLR SSNQVDTHEI NQKVGQGRGG VGSYFRRPEE ALTSSHWQII
1301: QLVPSPQSGQ FFAWVVVEGL MLKIPLSIPR VFYINSKVPI DEYFQGKCVN KILPHGRPCY SLTEVKIQED QFKKESKKRA ALLADPGVEG IYETKVPLEF
1401: SAICQIGCVC KIDNKAKHRN TQDGWEVGEL HMKTTTECHY LKRSIPLVYL YNSTSTGRAI YVLYCHVSKL MSAVVVDPFN GNELLPSALE RQFRDSCLEL
1501: SLDSLSWDGI RFQVHYVDHP EAAKKIIQRA ISEYREENCG PTVAVIECPD FTFMKEGIKA LDDFPCVRIP FNDDDNSYQP VSWQRPAAKI AMFRCAAAFQ
1601: WLDRRITQSR YAHVPLGNFG LDWLTFTIDI FLSRALRDQQ QVLWVSDNGV PDLGGINNEE AFFADEVQQT SLVFPGAYRK VSVELKIHNL AVNALLKSNL
1701: VNEMEGGGFM GFEQDVNPRG INSNDNTSFD ETTGCAQAFR VLKQLIHSCL TDVRKSKNIY ADSILQRLSW WLCSPSSKLH DPALHLMLHK VMQKVFALLL
1801: TDLRRLGAII IYADFSKVII DTVKFDLSAA KAYCESLLST VRNSDIFEWI LLEPVHYWHS LLFMDQYNYA GIRADDEISL DEVTIEPKWS VARHLPEYIE
1901: RDFIIIIAKF IFDPWKFAIE NKKGSSESLE AQMIEYLREQ IGSTFINMLV KKVDDIMSHM KEINVSDASR VSGQAPKGDY SLEFIQVISA VLALDQNVQQ
2001: DVLVMRKSLL KYIKVKECAA EAEFLDPGPS FILPNVACSN CDAYRDLDIC RDPALLTEKE WSCADTQCGK IYDREQMESS LLEMVRQRER MYHMQDVVCI
2101: RCNQVKAAHL TEQCECSGSF RCKESGSEFS KRMEIFMDIA KRQKFRLLEE YISWIIYGPS Y
Arabidopsis Description
POL2ADNA polymerase epsilon catalytic subunit A [Source:UniProtKB/Swiss-Prot;Acc:F4HW04]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.