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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH18030 Soybean mitochondrion, plastid 5.94 87.31
Solyc11g067120.1.1 Tomato endoplasmic reticulum, plasma membrane 8.22 83.51
Solyc11g067130.1.1 Tomato nucleus 24.87 74.24
TraesCS1B01G156600.1 Wheat cytosol 74.52 71.71
TraesCS1D01G139000.1 Wheat cytosol 74.26 71.47
OQU85005 Sorghum nucleus 75.74 71.15
Os02t0511901-00 Rice nucleus 25.79 68.93
HORVU1Hr1G036500.57 Barley mitochondrion, nucleus 73.55 66.38
TraesCS1A01G130700.1 Wheat nucleus 74.31 66.09
Zm00001d016581_P004 Maize nucleus 73.65 65.24
KRH25189 Soybean nucleus 71.47 63.74
KRH31260 Soybean cytosol, nucleus, plastid 70.25 62.82
Solyc11g067140.1.1 Tomato mitochondrion, nucleus 29.34 62.02
VIT_06s0061g01610.t01 Wine grape nucleus 74.57 61.18
KRG99612 Soybean cytosol 8.68 60.42
AT1G08260.1 Thale cress nucleus 65.33 59.56
Bra018641.1-P Field mustard nucleus 63.86 59.12
CDX95079 Canola nucleus 63.71 58.62
CDX93579 Canola nucleus 64.47 58.53
AT2G27120.2 Thale cress nucleus 63.55 58.48
Os02t0511900-00 Rice nucleus 19.9 57.56
Solyc11g067110.1.1 Tomato nucleus 9.19 41.8
GSMUA_Achr9P17920_001 Banana nucleus 0.25 2.16
Protein Annotations
KEGG:00230+2.7.7.7KEGG:00240+2.7.7.7Gene3D:1.10.132.60MapMan:13.2.3.3.1Gene3D:3.30.420.10ncoils:Coil
InterPro:DNA-dir_DNA_pol_BInterPro:DNA-dir_DNA_pol_B_exonucInterPro:DNA-dir_DNA_pol_B_multi_domInterPro:DNA_pol_e_suA_CGO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003824GO:GO:0003887GO:GO:0004518GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006259
GO:GO:0006260GO:GO:0006281GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0008270
GO:GO:0008408GO:GO:0008622GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016787GO:GO:0071897GO:GO:0090305EnsemblPlantsGene:GSMUA_Achr9G17910_001EnsemblPlants:GSMUA_Achr9P17910_001
EnsemblPlants:GSMUA_Achr9T17910_001InterPro:IPR036397UniProt:M0U198PFAM:PF00136PFAM:PF03104PFAM:PF08490
InterPro:POL2PANTHER:PTHR10670InterPro:RNaseH-like_sfInterPro:RNaseH_sfSMART:SM00486SMART:SM01159
SUPFAM:SSF53098SUPFAM:SSF56672TMHMM:TMhelixUniParc:UPI000296F641SEG:seg:
Description
Putative DNA polymerase epsilon catalytic subunit A [Source:GMGC_GENE;Acc:GSMUA_Achr9G17910_001]
Coordinates
chr9:-:12512224..12540314
Molecular Weight (calculated)
225745.0 Da
IEP (calculated)
6.732
GRAVY (calculated)
-0.232
Length
1970 amino acids
Sequence
(BLAST)
0001: MDRYVPLDVR CGLWYDISVF SAGILLEKRS DLLQRAEVHV CAFDIETTKL PLKFPDAEYD LIMMISYMID GQGYLIINRE CVGEDIEDLE YTPKPEFEGC
0101: FKVRNVKDEG ELLKAWFAHM QEAKPGIYVT YNGDFFDWPF LEKRASHHGI KMSEEIGFQC DSNQGECRAK FSCHLDCFAW VKRDSYLPQG SQGLKAVTKA
0201: KLGYDPLEVN PEDMVRFAME QPQMMASYSV SDAVATYFLY MTYVHPFIFS LATIIPMPPD EVLRKGSGTL CEMLLMVQAY KANVICPNKH QSDPEKFYNN
0301: RPLESETYIG GHVECLESGV FRSDLPIKFQ LDPSAYEQLI GNLDRDLQFA ITVEGKMSIE SIANYEDVKN AIMEKLIFLR DHPTCEECPL IYHLDVAAMY
0401: PNIILTNRLQ PPSIVTDVVC TACDFNRPGK NCLRKLEWVW RGETYMAKKS DYYYIRKQIQ SELVEFGDGK TKPFLDLPKS EQQLRLKERL KKYCQKAYKR
0501: VLDKPVTELR EAGICMRENP FYVDTVRSFR DRRYEYKGLN KVWKGKLADA KASRNQMNIQ EAQDMVILYD SLQLAHKCIL NSFYGYVMRK GARWYSMEMA
0601: GVVTYTGAKI IQNARLLVEK IGRPLELDTD GIWCALPGSF PENFTFKTSD GKKFTISYPC VMLNVDVARN NTNDQYQTLK DPVTRTYTTH SECSIEFEVD
0701: GPYKASKLQF FLFLRYNSEG ILIKKRYAVF NYDGTLAELK GFEIKRRGEL KLIKVFQAEV FDKFLHGSTL EECYAAVASV ANRWLDLLDN QGIDIADSEL
0801: LDYISESSTM SKSLVDYGEQ KSCAVTTAKR LAHFLGDAMV KDKGLHCQYI VAREPQGTPV SERAVPVAIF ETDAEIAKYY LRKWCKITSD VGIRSIVDWS
0901: YYTLRLSSAI QKIITIPAAM QKVSNPVPRV VHPDWLHKKV CEKEDRFRQR KLVDIFNTAK REQVAQDETI VGDIEEILVK DGARVLPPRP VEQDLTLFRS
1001: NQSLVSSSNN GISSENGDKT IDYQAWLETK KRKWKDSREE RKRRSILGYV NVIEGTLLSL TWHFLGCQIG LVRSHWQILQ LVPRTQPGHF YAWVIADGTM
1101: HKVPINVPRV FYLNSKAPIT EEFPGRRVKK ILPHSRPNFN LIEVVISEEQ FRAESKKLAA HLADPEVEGI YETKVPLEFH AIVQIGCVCQ VDKAAKLRNA
1201: QDGWNLDELH MKTTAECSYL EQGVTYFYLY HSFSEGRAIY VIYFPTSWTI SVVVVNPFQN KELSSAILEK QFREACLALS IEPPTNGSAT FKVEYVRSID
1301: VGSKILQRTL VAHRHQHLQP AIGIIECPGF QVLKSRIRIL EDFPCVTMSF NACDSNYQAL GWQVTAGKIS MQRCAASSQW FNERILLSRY AHVPLGNFEL
1401: DWLLFTADVF FSRALRDKQQ VLWISDDGIP DFGGIYEGDT CFADEVNQPA ASYPGAYRKV AVELKIHHLA VNALLKSSLV EEMDGGSLFC HESDSHPPAH
1501: DNETDYDEAS SCAPAFQVVK QLIQRCISDA VASGNVFADA ILQHLYRWLC SPMSKLHDPA LHRVLNMFMK KVFALLLVEF KKLGATIIFA NFSKIIIDTG
1601: KIELSAARAY CDCLLRTLQT RELFEWIELE PLHFWHSLLF MDQLNYGGIQ AKWPTGLPVE DMEDNSQMNM VSSWNIAEYL PKVTKDHFVL IVSEFLYIPW
1701: KYLQKQVLIR TTNMMDDSTS TQSITVTAAE TIEACVNEYI KEQISNYFTE KLLNIVCDIL RRFKGENKGI KDLHATHVLP CSYGSQGNKG DAALEFIKHV
1801: CAVLALDQNV KHDVLRMRKN LLKRIHVKEF SPEAQFRDPC QSFTLPNIIC SYCNDCRDLD FCHDSVLLED NWHCAVPHCG QPYNREQMEN ALLQVVRQRE
1901: RLYHLQDLVC DRCRQVKAAH LVEQCACGGS FRCHEDLLAF LGKMQVFLSI AACQKFQLLH DCTSWILQVR
Best Arabidopsis Sequence Match ( AT1G08260.1 )
(BLAST)
0001: MSGDNRRRDR KDTRWSKKPK VVNTAEDELE SKLGFGLFSE GETRLGWLLT FSSSSWEDRD TGKVYSCVDL YFVTQDGFSF KTKYKFRPYF YAATKDKMEL
0101: ELEAYLRRRY ERQVADIEIV EKEDLDLKNH LSGLQKKYLK ISFDTVQQLM EVKRDLLHIV ERNQAKFDAL EAYESILAGK REQRPQDCLD SIVDLREYDV
0201: PYHVRFAIDN DVRSGQWYNV SISSTDVILE KRTDLLQRAE VRVCAFDIET TKLPLKFPDA EYDQIMMISY MVDGQGFLII NRECVGEDVE DLEYTPKPEF
0301: EGYFKVTNVK NEVELLQRWF YHMQELKPGI YVTYNGDFFD WPFIERRASH HGIKMNEELG FRCDQNQGEC RAKFACHLDC FAWVKRDSYL PQGSHGLKAV
0401: TKAKLGYDPL EVNPEDMVRF AMEKPQTMAS YSVSDAVATY YLYMTYVNPF IFSLATIIPM VPDEVLRKGS GTLCEMLLMV EAYKANVVCP NKNQADPEKF
0501: YQNQLLESET YIGGHVECLE SGVFRSDIPT SFKLDSSAYQ QLIDNLGRDL EYAITVEGKM RMDSISNYDE VKDEIKEKLE KLRDDPIREE GPLIYHLDVA
0601: AMYPNIILTN RLQPPSIVTD EICTACDFNR PGKTCLRKLE WVWRGVTFMG KKSDYYHLKK QIESEFVDAG ANIMSSKSFL DLPKVDQQSK LKERLKKYCQ
0701: KAYKRVLDKP ITEVREAGIC MRENPFYVDT VRSFRDRRYE YKTLNKVWKG KLSEAKASGN SIKIQEAQDM VVVYDSLQLA HKCILNSFYG YVMRKGARWY
0801: SMEMAGVVTY TGAKIIQNAR LLIERIGKPL ELDTDGIWCC LPGSFPENFT FKTIDMKKLT ISYPCVMLNV DVAKNNTNDQ YQTLVDPVRK TYKSHSECSI
0901: EFEVDGPYKA MIIPASKEEG ILIKKRYAVF NHDGTLAELK GFEIKRRGEL KLIKVFQAEL FDKFLHGSTL EECYSAVAAV ADRWLDLLDN QGKDIADSEL
1001: LDYISESSTM SKSLADYGEQ KSCAVTTAKR LAEFLGVTMV KDKGLRCQYI VACEPKGTPV SERAVPVAIF TTNPEVMKFH LRKWCKTSSD VGIRLIIDWS
1101: YYKQRLSSAI QKVITIPAAM QKVANPVPRV LHPDWLHKKV REKDDKFRQR KLVDMFSSAN KDVVLDTDLP VTKDNVEDIE DFCKENRPSV KGPKPIARSY
1201: EVNKKQSECE QQESWDTEFH DISFQNIDKS VNYQGWLELK KRKWKVTLEK KKKRRLGDLR SSNQVDTHEI NQKVGQGRGG VGSYFRRPEE ALTSSHWQII
1301: QLVPSPQSGQ FFAWVVVEGL MLKIPLSIPR VFYINSKVPI DEYFQGKCVN KILPHGRPCY SLTEVKIQED QFKKESKKRA ALLADPGVEG IYETKVPLEF
1401: SAICQIGCVC KIDNKAKHRN TQDGWEVGEL HMKTTTECHY LKRSIPLVYL YNSTSTGRAI YVLYCHVSKL MSAVVVDPFN GNELLPSALE RQFRDSCLEL
1501: SLDSLSWDGI RFQVHYVDHP EAAKKIIQRA ISEYREENCG PTVAVIECPD FTFMKEGIKA LDDFPCVRIP FNDDDNSYQP VSWQRPAAKI AMFRCAAAFQ
1601: WLDRRITQSR YAHVPLGNFG LDWLTFTIDI FLSRALRDQQ QVLWVSDNGV PDLGGINNEE AFFADEVQQT SLVFPGAYRK VSVELKIHNL AVNALLKSNL
1701: VNEMEGGGFM GFEQDVNPRG INSNDNTSFD ETTGCAQAFR VLKQLIHSCL TDVRKSKNIY ADSILQRLSW WLCSPSSKLH DPALHLMLHK VMQKVFALLL
1801: TDLRRLGAII IYADFSKVII DTVKFDLSAA KAYCESLLST VRNSDIFEWI LLEPVHYWHS LLFMDQYNYA GIRADDEISL DEVTIEPKWS VARHLPEYIE
1901: RDFIIIIAKF IFDPWKFAIE NKKGSSESLE AQMIEYLREQ IGSTFINMLV KKVDDIMSHM KEINVSDASR VSGQAPKGDY SLEFIQVISA VLALDQNVQQ
2001: DVLVMRKSLL KYIKVKECAA EAEFLDPGPS FILPNVACSN CDAYRDLDIC RDPALLTEKE WSCADTQCGK IYDREQMESS LLEMVRQRER MYHMQDVVCI
2101: RCNQVKAAHL TEQCECSGSF RCKESGSEFS KRMEIFMDIA KRQKFRLLEE YISWIIYGPS Y
Arabidopsis Description
POL2ADNA polymerase epsilon catalytic subunit A [Source:UniProtKB/Swiss-Prot;Acc:F4HW04]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.