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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G156600.1 Wheat cytosol 90.84 96.87
TraesCS1D01G139000.1 Wheat cytosol 90.56 96.58
TraesCS1A01G130700.1 Wheat nucleus 97.48 96.07
Os02t0511900-00 Rice nucleus 27.76 88.99
Os02t0511901-00 Rice nucleus 30.0 88.87
OQU85005 Sorghum nucleus 84.38 87.84
Zm00001d016581_P004 Maize nucleus 86.9 85.3
Solyc11g067120.1.1 Tomato endoplasmic reticulum, plasma membrane 7.28 81.96
KRH18030 Soybean mitochondrion, plastid 4.63 75.37
GSMUA_Achr9P17910_001 Banana nucleus 66.38 73.55
Solyc11g067130.1.1 Tomato nucleus 21.85 72.27
Solyc11g067110.1.1 Tomato nucleus 14.15 71.36
KRH25189 Soybean nucleus 68.76 67.95
KRH31260 Soybean cytosol, nucleus, plastid 67.57 66.95
VIT_06s0061g01610.t01 Wine grape nucleus 72.01 65.47
AT1G08260.1 Thale cress nucleus 64.73 65.39
Bra018641.1-P Field mustard nucleus 63.63 65.27
CDX95079 Canola nucleus 63.54 64.78
CDX93579 Canola nucleus 64.13 64.52
AT2G27120.2 Thale cress nucleus 62.3 63.52
Solyc11g067140.1.1 Tomato mitochondrion, nucleus 25.93 60.73
GSMUA_Achr9P17920_001 Banana nucleus 6.37 59.91
KRG99612 Soybean cytosol 7.6 58.66
Protein Annotations
KEGG:00230+2.7.7.7KEGG:00240+2.7.7.7Gene3D:1.10.132.60MapMan:13.2.3.3.1Gene3D:3.30.420.10UniProt:A0A287F504
InterPro:DNA-dir_DNA_pol_BInterPro:DNA-dir_DNA_pol_B_exonucInterPro:DNA-dir_DNA_pol_B_multi_domInterPro:DNA_pol_e_suA_CGO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003824GO:GO:0003887GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006259GO:GO:0006260
GO:GO:0006281GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0008622
GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0071897EnsemblPlantsGene:HORVU1Hr1G036500EnsemblPlants:HORVU1Hr1G036500.57
InterPro:IPR036397PFAM:PF00136PFAM:PF03104PFAM:PF08490InterPro:POL2PANTHER:PTHR10670
InterPro:RNaseH-like_sfInterPro:RNaseH_sfSMART:SM00486SMART:SM01159SUPFAM:SSF53098SUPFAM:SSF56672
UniParc:UPI000B47C69ESEG:seg::::
Description
No Description!
Coordinates
chrchr1H:-:244967080..244997984
Molecular Weight (calculated)
248556.0 Da
IEP (calculated)
6.749
GRAVY (calculated)
-0.366
Length
2183 amino acids
Sequence
(BLAST)
0001: GRRRRPSAGG GGGGGGGGGG GGGSWGGRRS GSSAAKEQRL RLGAEELLEG RLGFAPYTQG DRRLGWLLTF SPSSWEDEDT GKIYSCVDLY FVSQDGSTFK
0101: VKYKFPPYFY AATKEKTELE VEAYLRRRYE GEIADIEIIE KEDLDLKNHL SGLKRKYLKI QFDTVQQLMR VRSDLMHVVE KNEEERDAVD AFESIYGVKR
0201: YPVLCSAKLV ERPQDYINCI IDLREYDVPY HVRFAIDNDV RSGQWYNVGV SGSDVLLQRR EDLLQRAEVH VCAFDIETTK LPLKFPDAEY DSVMMISYMI
0301: DGQGYLIINR ECVGEDIEDL EYTPKPEFEG HFRVKNVADE VGLLKAWFSH MQEVKPGIYV TYNGDFFDWP FLEKRAAHHG IKMNEEIGFQ CDSNQGECRA
0401: KFSCHLDCFA WVKRDSYLPQ GSQGLKAVTK AKLGYDPLEV NPEDMVRFAM EQPQTMASYS VSDAVATYYL YMTYVHPFIF SLATIIPMSP DEVLRKGSGT
0501: LCEMLLMVQA FKASIICPNK HQSDLEKFYN NRLVESETYI GGHVECLETG VFRSDLPTKF QLEPSAFEQL IENLDRDLQY AIAVEGKLDI DSVTNYDEVK
0601: DAIKQKLVSL RDHPTREECP LIYHLDVAAM YPNIILTNRL QPPSIVTDVD CTACDFNRPG KNCLRTLEWV WRGETYTAKK SDYHHIKRQI ESEMIQAGGV
0701: TSSKPFLDLS KPEHLLKLKD RLKKYCQKAY KRVVDKPITE VREAGICMRE NSFYVDTVRS FRDRRYEYKG LNKTWKGKLS EAKASGNSIK IQEAQDMVVL
0801: YDSLQLAHKG ARWYSMEMAG VVTYTGAKII QNARLLVDKI GRPLELDTDG IWCVLPGSFP ENFTFKTKAE KKLTISYPCV MLNVDVARTN TNDQYQTLKD
0901: PVNKLYTTNS ECSIEFEVDG PYKAMILPAS KEEGILIKKR YAVFNEDGTL AELKGFEIKR RGELKLIKVF QAEVFDKFLH GSTLEECYAA VASVANRWLD
1001: LLDNQGIDIS DSELLGFISE SSTMSKSLVD YGEQKSCAVT TAKRLAEFLG DSMVKDKGLH CQYIVAREPQ GTPVSERAVP VAIFETDAEV AKFYLRKWCK
1101: VSTEANIRFI LDWSYYKQRL SSAIQKIITI PAAMQKISNP VPRVLHPDWL HKKVREKDDR FRQRKLRDMF SPLNKDMGMH NLNGTGDIED LLTSDKGLRK
1201: VTASHGFNMG KENHPNGLPS AEASLGHCKN QQKSVIRSNE PLRDDSADER VDRSTDYQGW LEARKRKWKY VREQKKRRRL GAAASSEGPS NNLFSARNII
1301: QLAPSTMPGR FFAWVVADGI MFKIPINVPR VFYLNTKAPI TDEFPGRRVK KILPHGKPSF NLIEVVTSEE QFRTEGRKLA AHLAEPDVEG IYETKIPLEL
1401: NAILQIGCVC KVDKSAKKRN IQDGWDLAEL QMKTTAEFSY LEQTVSFFYL YHSLSEGRAV YVMYFPTSLR VHAVVVNPFR NKELSPAFLE KQFRDACQTA
1501: DPLHENLTFH VDYHTSMDAG SKYVQRMLLE YRQQHPGPVI GIIECPKLQA IRESVRALDD FPCVTIPCNA RDNNYQALGW QATAGRTSMQ RCAASTQWFN
1601: ERISLARYAH VPLGNFELDW LLFTADVFFS RALHDQQQVL WISDDGIPDL GGTYEGDTCF ADEVIQPALT YPGAYRRVSV ELKIHHLAVN SLLKSSQVDE
1701: MEGGSIGNFE NDIPPGPNAT ETDYNDASLC LPAFQVLKQL IQRCISDAVS SGNVFADAIL QHLYRWLCSP RSRLHDPALH RLLHNVMKKV FALLLAEFRK
1801: LGANVIFANF SKIIIDTGKV DLPSARAYCD SLLKTLQTRD LFEWIELEPL HYWHSLLFMD QYNYGGIQAK TQNVTSVDSS DGEDDIDIVS SWNIAEYLPK
1901: ATQDHFVLIV SEFLYVPWKY MKEQVACRAA VRDDTSCTPS ITIMAAENLE GQVVDYLRGQ IGTYFAEKLL TIVSDILLHF KGKGKSESVG PSNRELDPHL
2001: HKGDAALEFI KHICAVLALD QNVQHDILRM RKNLLKLVRV KEFAPEAQFQ DPCAAFILPN VICSYCNDCR DLDLCRDSTL QGHEWRCAVP QCGQPYHREE
2101: MENALLQIVR QRERLYHLQD LVCVRCRQVK AAHVSEQCNC GGSFRCKEEA PQFLGKMRVF LNVAVSQKFE LLQDCVRWIL EVR
Best Arabidopsis Sequence Match ( AT1G08260.1 )
(BLAST)
0001: MSGDNRRRDR KDTRWSKKPK VVNTAEDELE SKLGFGLFSE GETRLGWLLT FSSSSWEDRD TGKVYSCVDL YFVTQDGFSF KTKYKFRPYF YAATKDKMEL
0101: ELEAYLRRRY ERQVADIEIV EKEDLDLKNH LSGLQKKYLK ISFDTVQQLM EVKRDLLHIV ERNQAKFDAL EAYESILAGK REQRPQDCLD SIVDLREYDV
0201: PYHVRFAIDN DVRSGQWYNV SISSTDVILE KRTDLLQRAE VRVCAFDIET TKLPLKFPDA EYDQIMMISY MVDGQGFLII NRECVGEDVE DLEYTPKPEF
0301: EGYFKVTNVK NEVELLQRWF YHMQELKPGI YVTYNGDFFD WPFIERRASH HGIKMNEELG FRCDQNQGEC RAKFACHLDC FAWVKRDSYL PQGSHGLKAV
0401: TKAKLGYDPL EVNPEDMVRF AMEKPQTMAS YSVSDAVATY YLYMTYVNPF IFSLATIIPM VPDEVLRKGS GTLCEMLLMV EAYKANVVCP NKNQADPEKF
0501: YQNQLLESET YIGGHVECLE SGVFRSDIPT SFKLDSSAYQ QLIDNLGRDL EYAITVEGKM RMDSISNYDE VKDEIKEKLE KLRDDPIREE GPLIYHLDVA
0601: AMYPNIILTN RLQPPSIVTD EICTACDFNR PGKTCLRKLE WVWRGVTFMG KKSDYYHLKK QIESEFVDAG ANIMSSKSFL DLPKVDQQSK LKERLKKYCQ
0701: KAYKRVLDKP ITEVREAGIC MRENPFYVDT VRSFRDRRYE YKTLNKVWKG KLSEAKASGN SIKIQEAQDM VVVYDSLQLA HKCILNSFYG YVMRKGARWY
0801: SMEMAGVVTY TGAKIIQNAR LLIERIGKPL ELDTDGIWCC LPGSFPENFT FKTIDMKKLT ISYPCVMLNV DVAKNNTNDQ YQTLVDPVRK TYKSHSECSI
0901: EFEVDGPYKA MIIPASKEEG ILIKKRYAVF NHDGTLAELK GFEIKRRGEL KLIKVFQAEL FDKFLHGSTL EECYSAVAAV ADRWLDLLDN QGKDIADSEL
1001: LDYISESSTM SKSLADYGEQ KSCAVTTAKR LAEFLGVTMV KDKGLRCQYI VACEPKGTPV SERAVPVAIF TTNPEVMKFH LRKWCKTSSD VGIRLIIDWS
1101: YYKQRLSSAI QKVITIPAAM QKVANPVPRV LHPDWLHKKV REKDDKFRQR KLVDMFSSAN KDVVLDTDLP VTKDNVEDIE DFCKENRPSV KGPKPIARSY
1201: EVNKKQSECE QQESWDTEFH DISFQNIDKS VNYQGWLELK KRKWKVTLEK KKKRRLGDLR SSNQVDTHEI NQKVGQGRGG VGSYFRRPEE ALTSSHWQII
1301: QLVPSPQSGQ FFAWVVVEGL MLKIPLSIPR VFYINSKVPI DEYFQGKCVN KILPHGRPCY SLTEVKIQED QFKKESKKRA ALLADPGVEG IYETKVPLEF
1401: SAICQIGCVC KIDNKAKHRN TQDGWEVGEL HMKTTTECHY LKRSIPLVYL YNSTSTGRAI YVLYCHVSKL MSAVVVDPFN GNELLPSALE RQFRDSCLEL
1501: SLDSLSWDGI RFQVHYVDHP EAAKKIIQRA ISEYREENCG PTVAVIECPD FTFMKEGIKA LDDFPCVRIP FNDDDNSYQP VSWQRPAAKI AMFRCAAAFQ
1601: WLDRRITQSR YAHVPLGNFG LDWLTFTIDI FLSRALRDQQ QVLWVSDNGV PDLGGINNEE AFFADEVQQT SLVFPGAYRK VSVELKIHNL AVNALLKSNL
1701: VNEMEGGGFM GFEQDVNPRG INSNDNTSFD ETTGCAQAFR VLKQLIHSCL TDVRKSKNIY ADSILQRLSW WLCSPSSKLH DPALHLMLHK VMQKVFALLL
1801: TDLRRLGAII IYADFSKVII DTVKFDLSAA KAYCESLLST VRNSDIFEWI LLEPVHYWHS LLFMDQYNYA GIRADDEISL DEVTIEPKWS VARHLPEYIE
1901: RDFIIIIAKF IFDPWKFAIE NKKGSSESLE AQMIEYLREQ IGSTFINMLV KKVDDIMSHM KEINVSDASR VSGQAPKGDY SLEFIQVISA VLALDQNVQQ
2001: DVLVMRKSLL KYIKVKECAA EAEFLDPGPS FILPNVACSN CDAYRDLDIC RDPALLTEKE WSCADTQCGK IYDREQMESS LLEMVRQRER MYHMQDVVCI
2101: RCNQVKAAHL TEQCECSGSF RCKESGSEFS KRMEIFMDIA KRQKFRLLEE YISWIIYGPS Y
Arabidopsis Description
POL2ADNA polymerase epsilon catalytic subunit A [Source:UniProtKB/Swiss-Prot;Acc:F4HW04]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.