Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g067120.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 23.2 | 81.44 |
| Solyc11g067110.1.1 | Tomato | nucleus | 44.49 | 69.98 |
| GSMUA_Achr9P17920_001 | Banana | nucleus | 21.59 | 63.36 |
| HORVU1Hr1G036500.57 | Barley | mitochondrion, nucleus | 88.99 | 27.76 |
| TraesCS1A01G130700.1 | Wheat | nucleus | 88.99 | 27.36 |
| Zm00001d016581_P004 | Maize | nucleus | 84.58 | 25.9 |
| OQU85005 | Sorghum | nucleus | 77.24 | 25.08 |
| AT1G08260.1 | Thale cress | nucleus | 74.45 | 23.46 |
| TraesCS1D01G139000.1 | Wheat | cytosol | 70.34 | 23.4 |
| TraesCS1B01G156600.1 | Wheat | cytosol | 70.34 | 23.4 |
| CDX93579 | Canola | nucleus | 73.57 | 23.09 |
| Bra018641.1-P | Field mustard | nucleus | 72.1 | 23.07 |
| CDX95079 | Canola | nucleus | 71.51 | 22.75 |
| AT2G27120.2 | Thale cress | nucleus | 71.37 | 22.7 |
| KRH25189 | Soybean | nucleus | 73.13 | 22.54 |
| KRH31260 | Soybean | cytosol, nucleus, plastid | 72.54 | 22.42 |
| VIT_06s0061g01610.t01 | Wine grape | nucleus | 75.04 | 21.28 |
| GSMUA_Achr9P17910_001 | Banana | nucleus | 57.56 | 19.9 |
| KRG99612 | Soybean | cytosol | 4.11 | 9.89 |
| Solyc11g067130.1.1 | Tomato | nucleus | 4.7 | 4.85 |
| Os02t0511901-00 | Rice | nucleus | 0.29 | 0.27 |
| Solyc11g067140.1.1 | Tomato | mitochondrion, nucleus | 0.15 | 0.11 |
| KRH18030 | Soybean | mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | MapMan:13.2.3.3.1 | Gene3D:3.30.420.10 | UniProt:A0A0P0VJF5 | ProteinID:BAS78866.1 |
| InterPro:DNA-dir_DNA_pol_B | InterPro:DNA-dir_DNA_pol_B_exonuc | GO:GO:0000166 | GO:GO:0000278 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003824 | GO:GO:0003887 | GO:GO:0004518 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006260 |
| GO:GO:0006272 | GO:GO:0006281 | GO:GO:0006287 | GO:GO:0006297 | GO:GO:0006950 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0008310 | GO:GO:0008622 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016787 | GO:GO:0045004 | GO:GO:0071897 | GO:GO:0090305 |
| InterPro:IPR036397 | EnsemblPlantsGene:Os02g0511900 | EnsemblPlants:Os02t0511900-00 | PFAM:PF03104 | InterPro:POL2 | PANTHER:PTHR10670 |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00486 | SUPFAM:SSF53098 | SUPFAM:SSF56672 | UniParc:UPI000393882D |
| SEG:seg | : | : | : | : | : |
Description
Similar to DNA polymerase. (Os02t0511900-00)
Coordinates
chr2:+:18348858..18357419
Molecular Weight (calculated)
77914.7 Da
IEP (calculated)
5.021
GRAVY (calculated)
-0.402
Length
681 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGGGGDGR RRRPSAGGGG GGGGRGGGWR SGSSAAKDQR LRLGAEELLE SRLGFAPYTD SERRLGWLLT FSPSSWEDED TGKIYSCVDL YFVSQDGSTF
101: KVKYKFPPYF YAATKDKMEL EVEAYLRRRY EGDIADIEII EKEDLDLKNH LSGLKRKYLK IQFDTVQQLM RVRSDLLHVV EKNEEELNAA EAFESIYGVK
201: RVERPQDYIN CIIDLREYDV PYHVRFAIDN DVRCGQWYDV SVSSSDVLLH RREDLLQRAE VHVCAFDIET TKLPLKFPDA EYDTVMMISY MIDGQGYLII
301: NRECVGEDIE DLEYTPKPEF EGHFKVKNVA NELDLLKAWF SHMQEVKPGI YVTYNGDFFD WPFLEKRAAH HGIKMNEEIG FQCDNNQGEC RAKFSCHLDC
401: FAWVKRDSYL PQGSHGLKAV TKAKLGYDPL EVNPEDMVRF AMEQPQTMAS YSVSDAVATY YLYMTYVHPF IFSLATIIPM SPDEVLRKGS GTLCEMLLMV
501: QAFKANIICP NKHQADLEKF YNNRLLESET YIGGHVECLE TGVFRSDLPT KFQLEPSACE QLIANLDRDL QYAISVEGKL DIDSVTNYDE VKDAIKQKLV
601: SLRDHPIREE CPLIYHLDVA AMYPNIILTN RLQPPSIVTD VDCTACDFNR PGKNCLRTLE WVWRGETYMA KKRYTLGIYI L
101: KVKYKFPPYF YAATKDKMEL EVEAYLRRRY EGDIADIEII EKEDLDLKNH LSGLKRKYLK IQFDTVQQLM RVRSDLLHVV EKNEEELNAA EAFESIYGVK
201: RVERPQDYIN CIIDLREYDV PYHVRFAIDN DVRCGQWYDV SVSSSDVLLH RREDLLQRAE VHVCAFDIET TKLPLKFPDA EYDTVMMISY MIDGQGYLII
301: NRECVGEDIE DLEYTPKPEF EGHFKVKNVA NELDLLKAWF SHMQEVKPGI YVTYNGDFFD WPFLEKRAAH HGIKMNEEIG FQCDNNQGEC RAKFSCHLDC
401: FAWVKRDSYL PQGSHGLKAV TKAKLGYDPL EVNPEDMVRF AMEQPQTMAS YSVSDAVATY YLYMTYVHPF IFSLATIIPM SPDEVLRKGS GTLCEMLLMV
501: QAFKANIICP NKHQADLEKF YNNRLLESET YIGGHVECLE TGVFRSDLPT KFQLEPSACE QLIANLDRDL QYAISVEGKL DIDSVTNYDE VKDAIKQKLV
601: SLRDHPIREE CPLIYHLDVA AMYPNIILTN RLQPPSIVTD VDCTACDFNR PGKNCLRTLE WVWRGETYMA KKRYTLGIYI L
0001: MSGDNRRRDR KDTRWSKKPK VVNTAEDELE SKLGFGLFSE GETRLGWLLT FSSSSWEDRD TGKVYSCVDL YFVTQDGFSF KTKYKFRPYF YAATKDKMEL
0101: ELEAYLRRRY ERQVADIEIV EKEDLDLKNH LSGLQKKYLK ISFDTVQQLM EVKRDLLHIV ERNQAKFDAL EAYESILAGK REQRPQDCLD SIVDLREYDV
0201: PYHVRFAIDN DVRSGQWYNV SISSTDVILE KRTDLLQRAE VRVCAFDIET TKLPLKFPDA EYDQIMMISY MVDGQGFLII NRECVGEDVE DLEYTPKPEF
0301: EGYFKVTNVK NEVELLQRWF YHMQELKPGI YVTYNGDFFD WPFIERRASH HGIKMNEELG FRCDQNQGEC RAKFACHLDC FAWVKRDSYL PQGSHGLKAV
0401: TKAKLGYDPL EVNPEDMVRF AMEKPQTMAS YSVSDAVATY YLYMTYVNPF IFSLATIIPM VPDEVLRKGS GTLCEMLLMV EAYKANVVCP NKNQADPEKF
0501: YQNQLLESET YIGGHVECLE SGVFRSDIPT SFKLDSSAYQ QLIDNLGRDL EYAITVEGKM RMDSISNYDE VKDEIKEKLE KLRDDPIREE GPLIYHLDVA
0601: AMYPNIILTN RLQPPSIVTD EICTACDFNR PGKTCLRKLE WVWRGVTFMG KKSDYYHLKK QIESEFVDAG ANIMSSKSFL DLPKVDQQSK LKERLKKYCQ
0701: KAYKRVLDKP ITEVREAGIC MRENPFYVDT VRSFRDRRYE YKTLNKVWKG KLSEAKASGN SIKIQEAQDM VVVYDSLQLA HKCILNSFYG YVMRKGARWY
0801: SMEMAGVVTY TGAKIIQNAR LLIERIGKPL ELDTDGIWCC LPGSFPENFT FKTIDMKKLT ISYPCVMLNV DVAKNNTNDQ YQTLVDPVRK TYKSHSECSI
0901: EFEVDGPYKA MIIPASKEEG ILIKKRYAVF NHDGTLAELK GFEIKRRGEL KLIKVFQAEL FDKFLHGSTL EECYSAVAAV ADRWLDLLDN QGKDIADSEL
1001: LDYISESSTM SKSLADYGEQ KSCAVTTAKR LAEFLGVTMV KDKGLRCQYI VACEPKGTPV SERAVPVAIF TTNPEVMKFH LRKWCKTSSD VGIRLIIDWS
1101: YYKQRLSSAI QKVITIPAAM QKVANPVPRV LHPDWLHKKV REKDDKFRQR KLVDMFSSAN KDVVLDTDLP VTKDNVEDIE DFCKENRPSV KGPKPIARSY
1201: EVNKKQSECE QQESWDTEFH DISFQNIDKS VNYQGWLELK KRKWKVTLEK KKKRRLGDLR SSNQVDTHEI NQKVGQGRGG VGSYFRRPEE ALTSSHWQII
1301: QLVPSPQSGQ FFAWVVVEGL MLKIPLSIPR VFYINSKVPI DEYFQGKCVN KILPHGRPCY SLTEVKIQED QFKKESKKRA ALLADPGVEG IYETKVPLEF
1401: SAICQIGCVC KIDNKAKHRN TQDGWEVGEL HMKTTTECHY LKRSIPLVYL YNSTSTGRAI YVLYCHVSKL MSAVVVDPFN GNELLPSALE RQFRDSCLEL
1501: SLDSLSWDGI RFQVHYVDHP EAAKKIIQRA ISEYREENCG PTVAVIECPD FTFMKEGIKA LDDFPCVRIP FNDDDNSYQP VSWQRPAAKI AMFRCAAAFQ
1601: WLDRRITQSR YAHVPLGNFG LDWLTFTIDI FLSRALRDQQ QVLWVSDNGV PDLGGINNEE AFFADEVQQT SLVFPGAYRK VSVELKIHNL AVNALLKSNL
1701: VNEMEGGGFM GFEQDVNPRG INSNDNTSFD ETTGCAQAFR VLKQLIHSCL TDVRKSKNIY ADSILQRLSW WLCSPSSKLH DPALHLMLHK VMQKVFALLL
1801: TDLRRLGAII IYADFSKVII DTVKFDLSAA KAYCESLLST VRNSDIFEWI LLEPVHYWHS LLFMDQYNYA GIRADDEISL DEVTIEPKWS VARHLPEYIE
1901: RDFIIIIAKF IFDPWKFAIE NKKGSSESLE AQMIEYLREQ IGSTFINMLV KKVDDIMSHM KEINVSDASR VSGQAPKGDY SLEFIQVISA VLALDQNVQQ
2001: DVLVMRKSLL KYIKVKECAA EAEFLDPGPS FILPNVACRY YLTKTNARDL NKHSCDWLRL VIEKLFSEIE LSFGHKHKSL RIPSFRDILV HPCGDHHIKS
2101: TQQYQTCNTK EKKT
0101: ELEAYLRRRY ERQVADIEIV EKEDLDLKNH LSGLQKKYLK ISFDTVQQLM EVKRDLLHIV ERNQAKFDAL EAYESILAGK REQRPQDCLD SIVDLREYDV
0201: PYHVRFAIDN DVRSGQWYNV SISSTDVILE KRTDLLQRAE VRVCAFDIET TKLPLKFPDA EYDQIMMISY MVDGQGFLII NRECVGEDVE DLEYTPKPEF
0301: EGYFKVTNVK NEVELLQRWF YHMQELKPGI YVTYNGDFFD WPFIERRASH HGIKMNEELG FRCDQNQGEC RAKFACHLDC FAWVKRDSYL PQGSHGLKAV
0401: TKAKLGYDPL EVNPEDMVRF AMEKPQTMAS YSVSDAVATY YLYMTYVNPF IFSLATIIPM VPDEVLRKGS GTLCEMLLMV EAYKANVVCP NKNQADPEKF
0501: YQNQLLESET YIGGHVECLE SGVFRSDIPT SFKLDSSAYQ QLIDNLGRDL EYAITVEGKM RMDSISNYDE VKDEIKEKLE KLRDDPIREE GPLIYHLDVA
0601: AMYPNIILTN RLQPPSIVTD EICTACDFNR PGKTCLRKLE WVWRGVTFMG KKSDYYHLKK QIESEFVDAG ANIMSSKSFL DLPKVDQQSK LKERLKKYCQ
0701: KAYKRVLDKP ITEVREAGIC MRENPFYVDT VRSFRDRRYE YKTLNKVWKG KLSEAKASGN SIKIQEAQDM VVVYDSLQLA HKCILNSFYG YVMRKGARWY
0801: SMEMAGVVTY TGAKIIQNAR LLIERIGKPL ELDTDGIWCC LPGSFPENFT FKTIDMKKLT ISYPCVMLNV DVAKNNTNDQ YQTLVDPVRK TYKSHSECSI
0901: EFEVDGPYKA MIIPASKEEG ILIKKRYAVF NHDGTLAELK GFEIKRRGEL KLIKVFQAEL FDKFLHGSTL EECYSAVAAV ADRWLDLLDN QGKDIADSEL
1001: LDYISESSTM SKSLADYGEQ KSCAVTTAKR LAEFLGVTMV KDKGLRCQYI VACEPKGTPV SERAVPVAIF TTNPEVMKFH LRKWCKTSSD VGIRLIIDWS
1101: YYKQRLSSAI QKVITIPAAM QKVANPVPRV LHPDWLHKKV REKDDKFRQR KLVDMFSSAN KDVVLDTDLP VTKDNVEDIE DFCKENRPSV KGPKPIARSY
1201: EVNKKQSECE QQESWDTEFH DISFQNIDKS VNYQGWLELK KRKWKVTLEK KKKRRLGDLR SSNQVDTHEI NQKVGQGRGG VGSYFRRPEE ALTSSHWQII
1301: QLVPSPQSGQ FFAWVVVEGL MLKIPLSIPR VFYINSKVPI DEYFQGKCVN KILPHGRPCY SLTEVKIQED QFKKESKKRA ALLADPGVEG IYETKVPLEF
1401: SAICQIGCVC KIDNKAKHRN TQDGWEVGEL HMKTTTECHY LKRSIPLVYL YNSTSTGRAI YVLYCHVSKL MSAVVVDPFN GNELLPSALE RQFRDSCLEL
1501: SLDSLSWDGI RFQVHYVDHP EAAKKIIQRA ISEYREENCG PTVAVIECPD FTFMKEGIKA LDDFPCVRIP FNDDDNSYQP VSWQRPAAKI AMFRCAAAFQ
1601: WLDRRITQSR YAHVPLGNFG LDWLTFTIDI FLSRALRDQQ QVLWVSDNGV PDLGGINNEE AFFADEVQQT SLVFPGAYRK VSVELKIHNL AVNALLKSNL
1701: VNEMEGGGFM GFEQDVNPRG INSNDNTSFD ETTGCAQAFR VLKQLIHSCL TDVRKSKNIY ADSILQRLSW WLCSPSSKLH DPALHLMLHK VMQKVFALLL
1801: TDLRRLGAII IYADFSKVII DTVKFDLSAA KAYCESLLST VRNSDIFEWI LLEPVHYWHS LLFMDQYNYA GIRADDEISL DEVTIEPKWS VARHLPEYIE
1901: RDFIIIIAKF IFDPWKFAIE NKKGSSESLE AQMIEYLREQ IGSTFINMLV KKVDDIMSHM KEINVSDASR VSGQAPKGDY SLEFIQVISA VLALDQNVQQ
2001: DVLVMRKSLL KYIKVKECAA EAEFLDPGPS FILPNVACRY YLTKTNARDL NKHSCDWLRL VIEKLFSEIE LSFGHKHKSL RIPSFRDILV HPCGDHHIKS
2101: TQQYQTCNTK EKKT
Arabidopsis Description
POL2ADNA polymerase epsilon catalytic subunit A [Source:UniProtKB/Swiss-Prot;Acc:F4HW04]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.