Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G156600.1 Wheat cytosol 92.01 99.56
TraesCS1D01G139000.1 Wheat cytosol 91.87 99.41
HORVU1Hr1G036500.57 Barley mitochondrion, nucleus 96.07 97.48
OQU85005 Sorghum nucleus 84.56 89.32
Os02t0511900-00 Rice nucleus 27.36 88.99
Os02t0511901-00 Rice nucleus 29.39 88.33
Zm00001d016581_P004 Maize nucleus 86.82 86.47
KRH18030 Soybean mitochondrion, plastid 5.15 85.07
Solyc11g067120.1.1 Tomato endoplasmic reticulum, plasma membrane 7.13 81.44
GSMUA_Achr9P17910_001 Banana nucleus 66.09 74.31
Solyc11g067130.1.1 Tomato nucleus 22.03 73.94
Solyc11g067110.1.1 Tomato nucleus 13.86 70.9
KRH25189 Soybean nucleus 68.17 68.36
KRH31260 Soybean cytosol, nucleus, plastid 67.04 67.41
Bra018641.1-P Field mustard nucleus 63.52 66.12
AT1G08260.1 Thale cress nucleus 64.47 66.08
VIT_06s0061g01610.t01 Wine grape nucleus 71.29 65.76
CDX95079 Canola nucleus 63.57 65.76
CDX93579 Canola nucleus 64.02 65.35
AT2G27120.2 Thale cress nucleus 62.03 64.18
KRG99612 Soybean cytosol 8.13 63.6
Solyc11g067140.1.1 Tomato mitochondrion, nucleus 25.78 61.27
GSMUA_Achr9P17920_001 Banana nucleus 6.23 59.48
Protein Annotations
KEGG:00230+2.7.7.7KEGG:00240+2.7.7.7Gene3D:1.10.132.60MapMan:13.2.3.3.1Gene3D:3.30.420.10InterPro:DNA-dir_DNA_pol_B
InterPro:DNA-dir_DNA_pol_B_exonucInterPro:DNA-dir_DNA_pol_B_multi_domInterPro:DNA_pol_e_suA_CGO:GO:0000166GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003824GO:GO:0003887GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006259GO:GO:0006260GO:GO:0006281
GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0008622GO:GO:0009058
GO:GO:0009987GO:GO:0016740InterPro:IPR036397PFAM:PF00136PFAM:PF03104PFAM:PF08490
InterPro:POL2PANTHER:PTHR10670InterPro:RNaseH-like_sfInterPro:RNaseH_sfSMART:SM00486SMART:SM01159
SUPFAM:SSF53098SUPFAM:SSF56672EnsemblPlantsGene:TraesCS1A01G130700EnsemblPlants:TraesCS1A01G130700.1TIGR:cd05535TIGR:cd05779
SEG:seg:::::
Description
No Description!
Coordinates
chr1A:-:168554707..168590020
Molecular Weight (calculated)
252537.0 Da
IEP (calculated)
6.730
GRAVY (calculated)
-0.378
Length
2215 amino acids
Sequence
(BLAST)
0001: MSGGDGRRRR PSAGGGGVGG VGGSWGGRRS GSSAAKEQRT RLGAEELLEG RLGFAPYTQG DRRLGWLLTF SPSSWEDEDT GNIYSCVDLY FVSQDGSTFK
0101: VKYKFPPYFY AATKEKTELE VEAYLRRRYE GEIADIEIIE KEDLDLKNHL SGLKRKYLKI QFDTVQQLMR VRSDLMHVVE KNEEERDAVD AFESIYGVKR
0201: VERPQDYINC IIDLREYDVP YHVRFAIDND VRSGQWYNVG VSGSDVLLQR REDLLQRAEV HVCAFDIETT KLPLKFPDAE YDSVMMISYM IDGQGYLIIN
0301: RECVGEDIED LEYTPKPEFE GHFRVKNVAD EVGLLKAWFS HMQEVKPGIY VTYNGDFFDW PFLEKRAAHH GIKMNEEIGF QCDSNQGECR AKFSCHLDCF
0401: AWVKRDSYLP QGSQGLKAVT KAKLGYDPLE VNPEDMVRFA MEQPQTMASY SVSDAVATYY LYMTYVHPFI FSLATIIPMS PDEVLRKGSG TLCEMLLMVQ
0501: AFQANIICPN KHQADLEKFY NNRLVESETY IGGHVECLET GVFRSDLPTK FQLEPSAFEQ LIENLDRDLQ YAIAVEGKLD IDSVTNYDEV KDAIKQKLVS
0601: LRDHPTREEC PLIYHLDVAA MYPNIILTNR LQPPSIVTDV DCTACDFNRP GKNCLRTLEW VWRGETYTAK KSDYHHIKRQ IESEMIQTGG VTSSKPFLDL
0701: SKPEHLLKLK DRLKKYCQKG YKRVVDKPIT EVREAGICMR ENSFYVDTVR SFRDRRYEYK GLNKTWKGKL SEAKASGNSI KIQEAQDMVV LYDSLQLAHK
0801: CILNSFYGYV MRKGARWYSM EMAGVVTYTG AKIIQNARLL VDKIGRPLEL DTDGIWCVLP GSFPENFTFK TKAEKKLTIS YPCVMLNVDV ARTNTNDQYQ
0901: TLKDPVSKLY TTNSECSIEF EVDGPYKAMI LPASKEEGIL IKKRYAVFNE DGTLAELKGF EIKRRGELKL IKVFQAEVFD KFLHGSTLEE CYAAVASVAN
1001: RWLDLLDNQG IDISDSELLG FISESSTMSK SLVDYGEQKS CAVTTAKRLA EFLGDSMVKD KGLHCQYIVA REPQGTPVSE RAVPVAIFET DAEVAKFYLR
1101: KWCKVSTEAN IRFILDWSYY KQRLSSAIQK IITIPAAMQK ISNPVPRVLH PDWLHKKVRE KDDRFRQRKL RDMFSPLNKD MGMHNLNGTG DIEDLLTSDK
1201: GLRKATASHG FNIGKENHPN GSPSAKASLG HCKNQQKSVI RSNEPLRDDS ADEIVDRSTD YQGWLEARKR KWKYVREQKK RRRLGAAASS EGPSNNLFSA
1301: RNDSQLHGNG RNRSTFFQKQ ELSLFRSHWQ IIQLAPSTLP GRFFAWVVAE GIMFKIPINV PRVFYLNSKA PITDEFPGRR VKKILPHGKP SFNLIEVVTS
1401: EEQFRAEGRK LAAHLAEPDV EGIYETKIPL ELNAILQIGC VCKVDKSAEK RNIQDGWDLA ELQMKTTAEF SYLEQTVSFF YLYHSVSEGR AVYVMYFPTS
1501: LRVHAVVINP FRNKELSPAF LEKQFRDACQ TPDPLHENLT FQVDYHTSMD AGSKYVQRML LEYRQQHPGP VIGIIECPKL QAIRESVRAL DDFPCVTIPC
1601: NARDNNYQAL GWQATAGRTS MQRCAASTQW FNERISLARY AHVPLGNLEL DWLLFTADVF FSRALHDQQQ VLWISDDGIP DLGGTYEGDT CFADEVIQPA
1701: LTYPGAYRRI SVELKIHHLA VNSLLKSSQV DEMEGGSIGN FENDIPPGPN ATETDYNDAS LCLPAFQVLK QLIQRCISDA VSSGNVFADA ILQHLYRWLC
1801: SPRSRLHDPA LHRLLHNVMK KVFALLLAEF RKLGANVIFA NFSKIIIDTG KVDLPSARAY CDSLLKTLQT RDLFEWIELE PLHYWHSLLF MDQYNYGGIQ
1901: AKTQNVTSAD SSDGDDDIDI VSSWNIAEYL PKATQDHFVL IVSEFLYVPW KYMKEQVACR AAMRDDTSCT PSITIMAAEN LEGQVVDYLR GQIGTYFAEK
2001: LLTIVSDILL HFKGKGKSES VGPSNSELDP HLHKGGAALE FIKHICAVLA LDQNVQHDIL RMRKNLLKLV RVKEFAPEAQ FQDPYASFIL PNVICSYCND
2101: CRDLDLCRDS TLQGHEWRCA VPQCGQPYHR EEMENALLQI VRQRERLYHL QDLVCVRCRQ VKAAHVSEQC NCGGSFRCKE EAPQFLGKMR VFLNVAVSQK
2201: FELLQDCVRW ILEVR
Best Arabidopsis Sequence Match ( AT1G08260.1 )
(BLAST)
0001: MSGDNRRRDR KDTRWSKKPK VVNTAEDELE SKLGFGLFSE GETRLGWLLT FSSSSWEDRD TGKVYSCVDL YFVTQDGFSF KTKYKFRPYF YAATKDKMEL
0101: ELEAYLRRRY ERQVADIEIV EKEDLDLKNH LSGLQKKYLK ISFDTVQQLM EVKRDLLHIV ERNQAKFDAL EAYESILAGK REQRPQDCLD SIVDLREYDV
0201: PYHVRFAIDN DVRSGQWYNV SISSTDVILE KRTDLLQRAE VRVCAFDIET TKLPLKFPDA EYDQIMMISY MVDGQGFLII NRECVGEDVE DLEYTPKPEF
0301: EGYFKVTNVK NEVELLQRWF YHMQELKPGI YVTYNGDFFD WPFIERRASH HGIKMNEELG FRCDQNQGEC RAKFACHLDC FAWVKRDSYL PQGSHGLKAV
0401: TKAKLGYDPL EVNPEDMVRF AMEKPQTMAS YSVSDAVATY YLYMTYVNPF IFSLATIIPM VPDEVLRKGS GTLCEMLLMV EAYKANVVCP NKNQADPEKF
0501: YQNQLLESET YIGGHVECLE SGVFRSDIPT SFKLDSSAYQ QLIDNLGRDL EYAITVEGKM RMDSISNYDE VKDEIKEKLE KLRDDPIREE GPLIYHLDVA
0601: AMYPNIILTN RLQPPSIVTD EICTACDFNR PGKTCLRKLE WVWRGVTFMG KKSDYYHLKK QIESEFVDAG ANIMSSKSFL DLPKVDQQSK LKERLKKYCQ
0701: KAYKRVLDKP ITEVREAGIC MRENPFYVDT VRSFRDRRYE YKTLNKVWKG KLSEAKASGN SIKIQEAQDM VVVYDSLQLA HKCILNSFYG YVMRKGARWY
0801: SMEMAGVVTY TGAKIIQNAR LLIERIGKPL ELDTDGIWCC LPGSFPENFT FKTIDMKKLT ISYPCVMLNV DVAKNNTNDQ YQTLVDPVRK TYKSHSECSI
0901: EFEVDGPYKA MIIPASKEEG ILIKKRYAVF NHDGTLAELK GFEIKRRGEL KLIKVFQAEL FDKFLHGSTL EECYSAVAAV ADRWLDLLDN QGKDIADSEL
1001: LDYISESSTM SKSLADYGEQ KSCAVTTAKR LAEFLGVTMV KDKGLRCQYI VACEPKGTPV SERAVPVAIF TTNPEVMKFH LRKWCKTSSD VGIRLIIDWS
1101: YYKQRLSSAI QKVITIPAAM QKVANPVPRV LHPDWLHKKV REKDDKFRQR KLVDMFSSAN KDVVLDTDLP VTKDNVEDIE DFCKENRPSV KGPKPIARSY
1201: EVNKKQSECE QQESWDTEFH DISFQNIDKS VNYQGWLELK KRKWKVTLEK KKKRRLGDLR SSNQVDTHEI NQKVGQGRGG VGSYFRRPEE ALTSSHWQII
1301: QLVPSPQSGQ FFAWVVVEGL MLKIPLSIPR VFYINSKVPI DEYFQGKCVN KILPHGRPCY SLTEVKIQED QFKKESKKRA ALLADPGVEG IYETKVPLEF
1401: SAICQIGCVC KIDNKAKHRN TQDGWEVGEL HMKTTTECHY LKRSIPLVYL YNSTSTGRAI YVLYCHVSKL MSAVVVDPFN GNELLPSALE RQFRDSCLEL
1501: SLDSLSWDGI RFQVHYVDHP EAAKKIIQRA ISEYREENCG PTVAVIECPD FTFMKEGIKA LDDFPCVRIP FNDDDNSYQP VSWQRPAAKI AMFRCAAAFQ
1601: WLDRRITQSR YAHVPLGNFG LDWLTFTIDI FLSRALRDQQ QVLWVSDNGV PDLGGINNEE AFFADEVQQT SLVFPGAYRK VSVELKIHNL AVNALLKSNL
1701: VNEMEGGGFM GFEQDVNPRG INSNDNTSFD ETTGCAQAFR VLKQLIHSCL TDVRKSKNIY ADSILQRLSW WLCSPSSKLH DPALHLMLHK VMQKVFALLL
1801: TDLRRLGAII IYADFSKVII DTVKFDLSAA KAYCESLLST VRNSDIFEWI LLEPVHYWHS LLFMDQYNYA GIRADDEISL DEVTIEPKWS VARHLPEYIE
1901: RDFIIIIAKF IFDPWKFAIE NKKGSSESLE AQMIEYLREQ IGSTFINMLV KKVDDIMSHM KEINVSDASR VSGQAPKGDY SLEFIQVISA VLALDQNVQQ
2001: DVLVMRKSLL KYIKVKECAA EAEFLDPGPS FILPNVACSN CDAYRDLDIC RDPALLTEKE WSCADTQCGK IYDREQMESS LLEMVRQRER MYHMQDVVCI
2101: RCNQVKAAHL TEQCECSGSF RCKESGSEFS KRMEIFMDIA KRQKFRLLEE YISWIIYGPS Y
Arabidopsis Description
POL2ADNA polymerase epsilon catalytic subunit A [Source:UniProtKB/Swiss-Prot;Acc:F4HW04]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.