Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 2
- cytosol 1
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99612 | Soybean | cytosol | 95.52 | 45.23 |
| Solyc11g067130.1.1 | Tomato | nucleus | 88.06 | 17.88 |
| GSMUA_Achr9P17910_001 | Banana | nucleus | 87.31 | 5.94 |
| KRH31260 | Soybean | cytosol, nucleus, plastid | 96.27 | 5.86 |
| KRH25189 | Soybean | nucleus | 94.03 | 5.7 |
| AT2G27120.2 | Thale cress | nucleus | 89.55 | 5.6 |
| TraesCS1D01G139000.1 | Wheat | cytosol | 85.07 | 5.57 |
| TraesCS1B01G156600.1 | Wheat | cytosol | 85.07 | 5.57 |
| OQU85005 | Sorghum | nucleus | 86.57 | 5.53 |
| Bra018641.1-P | Field mustard | nucleus | 86.57 | 5.45 |
| CDX95079 | Canola | nucleus | 86.57 | 5.42 |
| CDX93579 | Canola | nucleus | 86.57 | 5.35 |
| AT1G08260.1 | Thale cress | nucleus | 85.82 | 5.32 |
| TraesCS1A01G130700.1 | Wheat | nucleus | 85.07 | 5.15 |
| VIT_06s0061g01610.t01 | Wine grape | nucleus | 86.57 | 4.83 |
| HORVU1Hr1G036500.57 | Barley | mitochondrion, nucleus | 75.37 | 4.63 |
| Zm00001d041354_P001 | Maize | cytosol | 1.49 | 0.59 |
| Zm00001d042827_P001 | Maize | cytosol | 1.49 | 0.59 |
| GSMUA_Achr9P17920_001 | Banana | nucleus | 0.75 | 0.43 |
| Solyc11g067110.1.1 | Tomato | nucleus | 0.75 | 0.23 |
| Os02t0511901-00 | Rice | nucleus | 0.75 | 0.14 |
| Solyc11g067140.1.1 | Tomato | mitochondrion, nucleus | 0.0 | 0.0 |
| Solyc11g067120.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
| Os02t0511900-00 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | Gene3D:1.10.287.690 | EntrezGene:100792022 | MapMan:13.2.3.3.1 | Gene3D:3.90.1600.10 |
| EMBL:ACUP02008020 | InterPro:DNA-dir_DNA_pol_B_multi_dom | InterPro:DNA_pol_palm_dom_sf | EnsemblPlantsGene:GLYMA_13G033700 | GO:GO:0000166 | GO:GO:0000278 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0003887 | GO:GO:0004518 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006259 | GO:GO:0006260 | GO:GO:0006272 | GO:GO:0006281 | GO:GO:0006287 | GO:GO:0006297 |
| GO:GO:0006950 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008310 | GO:GO:0008622 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016787 | GO:GO:0045004 | GO:GO:0071897 |
| GO:GO:0090305 | InterPro:IPR023211 | UniProt:K7LY48 | EnsemblPlants:KRH18030 | ProteinID:KRH18030 | ProteinID:KRH18030.1 |
| PFAM:PF00136 | InterPro:POL2 | PANTHER:PTHR10670 | SUPFAM:SSF56672 | UniParc:UPI00029697B0 | : |
Description
hypothetical protein
Coordinates
chr13:+:10577767..10578774
Molecular Weight (calculated)
15411.7 Da
IEP (calculated)
8.294
GRAVY (calculated)
-0.102
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVLYDSLQL AHKCILNSFY GYVMRKGARW YSMEMAGVVT YTGAKIIQNA RLLVEKIGKP LELDTDGIWC ALPGSFPENF TFKTRDPKKQ FTISYPCVIL
101: NVDVAINNSN DQYQTLTDPI RKMYTTRSEC FIEF
101: NVDVAINNSN DQYQTLTDPI RKMYTTRSEC FIEF
0001: MSGRRCDRRL NVQKVSAADE LETKLGFGLF SQGETRLGWL LTFASSSWED ADTGKTFSCV DLFFVTQDGS SFKTKYKFRP YLYAATKDNM ELEVEAYLRR
0101: RYERQVADIQ IVHKEDLYLK NHLSGLQKKY LKVSFDTVQQ LVEVKRDLLH IVERNLAKFN ALEAYESILS GKREQRPQDC LDSVVDLREY DVPYHVRFAI
0201: DNDVRSGQWY NVSISSTDVI LEKRTDLLQR AEVRVCAFDI ETVKLPLKFP DAEYDQIMMI SYMVDGQGFL ITNRECVGKD IEDLEYTPKP EFEGYFKVTN
0301: VTNEVELLRK WFSHMQELKP GIYVTYNGDF FDWPFIERRA SHHGIKMNEE LGFRCDQNQG ECRAKFVCHL DCFSWVKRDS YLPQGSQGLK AVTKVKLGYD
0401: PLEVNPEDMV RFAMEKPQTM ASYSVSDAVA TYYLYMTYVH PFVFSLATII PMVPDEVLRK GSGTLCEMLL MVEAYKANVV CPNKNQADPE KFYQGKLLES
0501: ETYIGGHVEC LQSGVFRSDI PTSFKLDASA YQQLIDNLGR DLEYAITVEG KMRMDSVSNF DEVKEVIREK LEKLRDDPIR EEGPLIYHLD VAAMYPNIIL
0601: TNRLQPPSIV TDEVCTACDF NGPEKTCLRK LEWVWRGVTF KGNKSEYYHL KKQIESESVD AGANMQSSKP FLDLPKVEQQ SKLKERLKKY CQKAYSRVLD
0701: KPITEVREAG ICMRENPFYV DTVRSFRDRR YEYKTLNKVW KGKLSEAKAS GNLIKIQEAH DMVVVYDSLQ LAHKCILNSF YGYVMRKGAR WYSMEMAGVV
0801: TYTGAKIIQN ARLLIERIGK PLELDTDGIW CALPGSFPEN FTFKTIDMKK FTISYPCVIL NVDVAKNNSN DQYQTLVDPV RKTYNSRSEC SIEFEVDGPY
0901: KAMIIPASKE EGILIKKRYA VFNHDGTIAE LKGFEMKRRG ELKLIKVFQA ELFDKFLHGS TLEECYSAVA AVANRWLDLL EGQGKDIADS ELLDYISESS
1001: TMSKSLADYG QQKSCAVTTA KRLADFLGDT MVKDKGLRCQ YIVAREPEGT PVSERAVPVA IFQTDDPEKK FYLQKWCKIS SYTGIRSIID WMYYKQRLHS
1101: AIQKVITIPA AMQKVANPVL RVRHPYWLEK KVCDKFRQGK IVDMFSSANK DHSTTQDNVV ADIEEFCKEN RPSVKGPKPV ARSFEVDRNH SEGKQQESWD
1201: PEFHDISLQN VDKNVDYQGW LELEKRKWKM TLTNKKKRRY SSSLFGFDLE QNINKKVCKG RVGVGSYFRR PEEALTSSYL QIIQLVQSPQ SGQFFAWVVV
1301: EGLMLKIPLT IPRVFYINSK ASIAGNFTGK CINKILPHGK PCYNLMEVNI QEDQFIKESK KLAALLADPE IEGIYETKMP LEFSAICQIG CVCKIEDTAK
1401: HRNTQDGWKL GELHRITTTE CRYLENSIPL VYLYHSTSTG RAVYVLYCHA SKLMSVVVVN PYGDKELLSS ALERQFRDRC QELSPEPFSW DGILFQVEYV
1501: DHPEAATKFL QKALCEYREE NCGATVAVIE CPDFNTTKEG VKALEDFPCV RIPFNDDDNS YQPVSWQRPA AKIAVLRCAS AIQWLDRRIA QSRYAHVPLG
1601: NFGRDWLTFT VDIFLSRALR DQQQVLWVSD NGVPDLGDIN NEETFLADET SLLFPGAYRK VSVELKVHRL AVNALLKSDL VSEMEGGGFL GVNSRGSSLN
1701: DNGSFDENNG CAQAFRVLKQ LIKRLLHDAC NSGNIYADSI LQHLSWWLRS PSSKLHDPAL HLMLHKVMQK VFALLLTDLR RLGAIIIYAD FSKVIIDTGK
1801: FDLSAAKTYC ESLLTVMGSR DIFKLILLEP VHYWHSLLFM DQHNYAGIRA TGDEISGNEV TIEPKWSVAR HLPEYIQKDF IIIVATFIFG PWKFALEKKR
1901: GSAESLEAEM VEYLKEQIGT RFISMIVEKI GNIRSHIKDI NVSDASWASG QAPKGDYTFE FIQIITAVLA LDQNVQQDVL VMRKILLKYI KVKECAAEAE
2001: FIDPGPSFIL PNVACSNCGA YRDLDFCRDS ALLTEKEWSC ADPQCVKIYD KEQIESSIIQ MVRQRERMYQ LQDLVCNRCN QVKAAHLTEQ CECSGSFRCK
2101: ESGSDFHKRI EIFLDIAKRQ KFRLLEECIS WILFATSC
0101: RYERQVADIQ IVHKEDLYLK NHLSGLQKKY LKVSFDTVQQ LVEVKRDLLH IVERNLAKFN ALEAYESILS GKREQRPQDC LDSVVDLREY DVPYHVRFAI
0201: DNDVRSGQWY NVSISSTDVI LEKRTDLLQR AEVRVCAFDI ETVKLPLKFP DAEYDQIMMI SYMVDGQGFL ITNRECVGKD IEDLEYTPKP EFEGYFKVTN
0301: VTNEVELLRK WFSHMQELKP GIYVTYNGDF FDWPFIERRA SHHGIKMNEE LGFRCDQNQG ECRAKFVCHL DCFSWVKRDS YLPQGSQGLK AVTKVKLGYD
0401: PLEVNPEDMV RFAMEKPQTM ASYSVSDAVA TYYLYMTYVH PFVFSLATII PMVPDEVLRK GSGTLCEMLL MVEAYKANVV CPNKNQADPE KFYQGKLLES
0501: ETYIGGHVEC LQSGVFRSDI PTSFKLDASA YQQLIDNLGR DLEYAITVEG KMRMDSVSNF DEVKEVIREK LEKLRDDPIR EEGPLIYHLD VAAMYPNIIL
0601: TNRLQPPSIV TDEVCTACDF NGPEKTCLRK LEWVWRGVTF KGNKSEYYHL KKQIESESVD AGANMQSSKP FLDLPKVEQQ SKLKERLKKY CQKAYSRVLD
0701: KPITEVREAG ICMRENPFYV DTVRSFRDRR YEYKTLNKVW KGKLSEAKAS GNLIKIQEAH DMVVVYDSLQ LAHKCILNSF YGYVMRKGAR WYSMEMAGVV
0801: TYTGAKIIQN ARLLIERIGK PLELDTDGIW CALPGSFPEN FTFKTIDMKK FTISYPCVIL NVDVAKNNSN DQYQTLVDPV RKTYNSRSEC SIEFEVDGPY
0901: KAMIIPASKE EGILIKKRYA VFNHDGTIAE LKGFEMKRRG ELKLIKVFQA ELFDKFLHGS TLEECYSAVA AVANRWLDLL EGQGKDIADS ELLDYISESS
1001: TMSKSLADYG QQKSCAVTTA KRLADFLGDT MVKDKGLRCQ YIVAREPEGT PVSERAVPVA IFQTDDPEKK FYLQKWCKIS SYTGIRSIID WMYYKQRLHS
1101: AIQKVITIPA AMQKVANPVL RVRHPYWLEK KVCDKFRQGK IVDMFSSANK DHSTTQDNVV ADIEEFCKEN RPSVKGPKPV ARSFEVDRNH SEGKQQESWD
1201: PEFHDISLQN VDKNVDYQGW LELEKRKWKM TLTNKKKRRY SSSLFGFDLE QNINKKVCKG RVGVGSYFRR PEEALTSSYL QIIQLVQSPQ SGQFFAWVVV
1301: EGLMLKIPLT IPRVFYINSK ASIAGNFTGK CINKILPHGK PCYNLMEVNI QEDQFIKESK KLAALLADPE IEGIYETKMP LEFSAICQIG CVCKIEDTAK
1401: HRNTQDGWKL GELHRITTTE CRYLENSIPL VYLYHSTSTG RAVYVLYCHA SKLMSVVVVN PYGDKELLSS ALERQFRDRC QELSPEPFSW DGILFQVEYV
1501: DHPEAATKFL QKALCEYREE NCGATVAVIE CPDFNTTKEG VKALEDFPCV RIPFNDDDNS YQPVSWQRPA AKIAVLRCAS AIQWLDRRIA QSRYAHVPLG
1601: NFGRDWLTFT VDIFLSRALR DQQQVLWVSD NGVPDLGDIN NEETFLADET SLLFPGAYRK VSVELKVHRL AVNALLKSDL VSEMEGGGFL GVNSRGSSLN
1701: DNGSFDENNG CAQAFRVLKQ LIKRLLHDAC NSGNIYADSI LQHLSWWLRS PSSKLHDPAL HLMLHKVMQK VFALLLTDLR RLGAIIIYAD FSKVIIDTGK
1801: FDLSAAKTYC ESLLTVMGSR DIFKLILLEP VHYWHSLLFM DQHNYAGIRA TGDEISGNEV TIEPKWSVAR HLPEYIQKDF IIIVATFIFG PWKFALEKKR
1901: GSAESLEAEM VEYLKEQIGT RFISMIVEKI GNIRSHIKDI NVSDASWASG QAPKGDYTFE FIQIITAVLA LDQNVQQDVL VMRKILLKYI KVKECAAEAE
2001: FIDPGPSFIL PNVACSNCGA YRDLDFCRDS ALLTEKEWSC ADPQCVKIYD KEQIESSIIQ MVRQRERMYQ LQDLVCNRCN QVKAAHLTEQ CECSGSFRCK
2101: ESGSDFHKRI EIFLDIAKRQ KFRLLEECIS WILFATSC
Arabidopsis Description
POL2BDNA polymerase epsilon catalytic subunit [Source:TAIR;Acc:AT2G27120]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.