Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g067140.1.1 | Tomato | mitochondrion, nucleus | 62.55 | 49.46 |
| TraesCS1B01G156600.1 | Wheat | cytosol | 88.74 | 31.95 |
| TraesCS1D01G139000.1 | Wheat | cytosol | 88.33 | 31.8 |
| OQU85005 | Sorghum | nucleus | 89.28 | 31.38 |
| HORVU1Hr1G036500.57 | Barley | mitochondrion, nucleus | 88.87 | 30.0 |
| TraesCS1A01G130700.1 | Wheat | nucleus | 88.33 | 29.39 |
| Zm00001d016581_P004 | Maize | nucleus | 86.84 | 28.78 |
| GSMUA_Achr9P17910_001 | Banana | nucleus | 68.93 | 25.79 |
| VIT_06s0061g01610.t01 | Wine grape | nucleus | 69.34 | 21.28 |
| KRH25189 | Soybean | nucleus | 62.42 | 20.82 |
| KRH31260 | Soybean | cytosol, nucleus, plastid | 60.79 | 20.34 |
| Bra018641.1-P | Field mustard | nucleus | 52.1 | 18.05 |
| CDX95079 | Canola | nucleus | 51.97 | 17.89 |
| CDX93579 | Canola | nucleus | 52.1 | 17.7 |
| AT1G08260.1 | Thale cress | nucleus | 51.15 | 17.45 |
| AT2G27120.2 | Thale cress | nucleus | 49.39 | 17.0 |
| Solyc11g067120.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 0.27 | 1.03 |
| KRH18030 | Soybean | mitochondrion, plastid | 0.14 | 0.75 |
| Solyc11g067110.1.1 | Tomato | nucleus | 0.27 | 0.46 |
| KRG99612 | Soybean | cytosol | 0.14 | 0.35 |
| Os02t0511900-00 | Rice | nucleus | 0.27 | 0.29 |
| Solyc11g067130.1.1 | Tomato | nucleus | 0.14 | 0.15 |
| GSMUA_Achr9P17920_001 | Banana | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | MapMan:13.2.3.3.1 | UniProt:A0A0P0VJF3 | ProteinID:BAS78867.1 | InterPro:DNA_pol_e_suA_C |
| GO:GO:0000166 | GO:GO:0000278 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0003887 | GO:GO:0004518 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006260 | GO:GO:0006272 | GO:GO:0006281 |
| GO:GO:0006287 | GO:GO:0006297 | GO:GO:0006950 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0008310 | GO:GO:0008622 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0016787 | GO:GO:0045004 | GO:GO:0071897 | GO:GO:0090305 | EnsemblPlantsGene:Os02g0511901 | EnsemblPlants:Os02t0511901-00 |
| PFAM:PF08490 | InterPro:POL2 | PANTHER:PTHR10670 | SMART:SM01159 | UniParc:UPI000393AFC3 | SEG:seg |
Description
Similar to DNA polymerase. (Os02t0511901-00)
Coordinates
chr2:+:18363893..18370186
Molecular Weight (calculated)
83725.3 Da
IEP (calculated)
6.406
GRAVY (calculated)
-0.183
Length
737 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLISSLSE GRGVYVMYFP TSFRIHAVVV NPFRNKELSP SFLEKQYRDA CQALGSLHEN ITFLVDYHTS IDAGSKHVQR MLLEYRQQHP GPVIGVIECP
101: KLQALKSAVR ALDDFPCVTI PCNARDNNYQ ALGWQATAGR TSMQRCAAST QWFNERISLA RYAHVPLGNF ELDWLLFTAD VFFSRALRDQ QQVLWISDDG
201: IPDLGGTYEG DTCFADEVIQ PALTYPGAYR RVAVELKIHH LAVNSLLKSS QVDEMEGGPI GSFANDMPAG PNGTETEFDD ATLCLPAFQV LKQLIQRCIS
301: DAVSSGNVFA DAILQHLYRW LCSPRSKLHD PALHHLLHNV MKKVFALMLA EFRKLGANVI FANFSKIIID TGKVDLLSAR AYCDSLLKTL QTRDIFEWVE
401: LEPLHYWHSL LFMDQYNYGG IQAKMQNATS EGSSDGDNDI DIVSSWNIAE YLPKATQDHF VLIVSEFLYV PWKYMKEQVA LRSTTRDETS CTPSITIMAA
501: ENLEVQVIGY LRDQISNYFA DKLLRIVSDI LHHFKGKGKS ESVELTNREP DPHTHKGDAA LEFIKHICAV LALDQNVQHD ILRMRKNLLK LVRVKEFAPE
601: AQFQDPCASF TLPNVICSYC NDCRDLDLCR DSTLQGQEWR CAVPQCGQPY HREQMENALL QVVRQRERLY HLQDLVCLRC RQVKAAHLSE QCSCGGAFRC
701: KEESSQFLSK MRVFLNVAVS QKFELLQDVV QWILEVR
101: KLQALKSAVR ALDDFPCVTI PCNARDNNYQ ALGWQATAGR TSMQRCAAST QWFNERISLA RYAHVPLGNF ELDWLLFTAD VFFSRALRDQ QQVLWISDDG
201: IPDLGGTYEG DTCFADEVIQ PALTYPGAYR RVAVELKIHH LAVNSLLKSS QVDEMEGGPI GSFANDMPAG PNGTETEFDD ATLCLPAFQV LKQLIQRCIS
301: DAVSSGNVFA DAILQHLYRW LCSPRSKLHD PALHHLLHNV MKKVFALMLA EFRKLGANVI FANFSKIIID TGKVDLLSAR AYCDSLLKTL QTRDIFEWVE
401: LEPLHYWHSL LFMDQYNYGG IQAKMQNATS EGSSDGDNDI DIVSSWNIAE YLPKATQDHF VLIVSEFLYV PWKYMKEQVA LRSTTRDETS CTPSITIMAA
501: ENLEVQVIGY LRDQISNYFA DKLLRIVSDI LHHFKGKGKS ESVELTNREP DPHTHKGDAA LEFIKHICAV LALDQNVQHD ILRMRKNLLK LVRVKEFAPE
601: AQFQDPCASF TLPNVICSYC NDCRDLDLCR DSTLQGQEWR CAVPQCGQPY HREQMENALL QVVRQRERLY HLQDLVCLRC RQVKAAHLSE QCSCGGAFRC
701: KEESSQFLSK MRVFLNVAVS QKFELLQDVV QWILEVR
0001: MSGDNRRRDR KDTRWSKKPK VVNTAEDELE SKLGFGLFSE GETRLGWLLT FSSSSWEDRD TGKVYSCVDL YFVTQDGFSF KTKYKFRPYF YAATKDKMEL
0101: ELEAYLRRRY ERQVADIEIV EKEDLDLKNH LSGLQKKYLK ISFDTVQQLM EVKRDLLHIV ERNQAKFDAL EAYESILAGK REQRPQDCLD SIVDLREYDV
0201: PYHVRFAIDN DVRSGQWYNV SISSTDVILE KRTDLLQRAE VRVCAFDIET TKLPLKFPDA EYDQIMMISY MVDGQGFLII NRECVGEDVE DLEYTPKPEF
0301: EGYFKVTNVK NEVELLQRWF YHMQELKPGI YVTYNGDFFD WPFIERRASH HGIKMNEELG FRCDQNQGEC RAKFACHLDC FAWVKRDSYL PQGSHGLKAV
0401: TKAKLGYDPL EVNPEDMVRF AMEKPQTMAS YSVSDAVATY YLYMTYVNPF IFSLATIIPM VPDEVLRKGS GTLCEMLLMV EAYKANVVCP NKNQADPEKF
0501: YQNQLLESET YIGGHVECLE SGVFRSDIPT SFKLDSSAYQ QLIDNLGRDL EYAITVEGKM RMDSISNYDE VKDEIKEKLE KLRDDPIREE GPLIYHLDVA
0601: AMYPNIILTN RLQPPSIVTD EICTACDFNR PGKTCLRKLE WVWRGVTFMG KKSDYYHLKK QIESEFVDAG ANIMSSKSFL DLPKVDQQSK LKERLKKYCQ
0701: KAYKRVLDKP ITEVREAGIC MRENPFYVDT VRSFRDRRYE YKTLNKVWKG KLSEAKASGN SIKIQEAQDM VVVYDSLQLA HKCILNSFYG YVMRKGARWY
0801: SMEMAGVVTY TGAKIIQNAR LLIERIGKPL ELDTDGIWCC LPGSFPENFT FKTIDMKKLT ISYPCVMLNV DVAKNNTNDQ YQTLVDPVRK TYKSHSECSI
0901: EFEVDGPYKA MIIPASKEEG ILIKKRYAVF NHDGTLAELK GFEIKRRGEL KLIKVFQAEL FDKFLHGSTL EECYSAVAAV ADRWLDLLDN QGKDIADSEL
1001: LDYISESSTM SKSLADYGEQ KSCAVTTAKR LAEFLGVTMV KDKGLRCQYI VACEPKGTPV SERAVPVAIF TTNPEVMKFH LRKWCKTSSD VGIRLIIDWS
1101: YYKQRLSSAI QKVITIPAAM QKVANPVPRV LHPDWLHKKV REKDDKFRQR KLVDMFSSAN KDVVLDTDLP VTKDNVEDIE DFCKENRPSV KGPKPIARSY
1201: EVNKKQSECE QQESWDTEFH DISFQNIDKS VNYQGWLELK KRKWKVTLEK KKKRRLGDLR SSNQVDTHEI NQKVGQGRGG VGSYFRRPEE ALTSSHWQII
1301: QLVPSPQSGQ FFAWVVVEGL MLKIPLSIPR VFYINSKVPI DEYFQGKCVN KILPHGRPCY SLTEVKIQED QFKKESKKRA ALLADPGVEG IYETKVPLEF
1401: SAICQIGCVC KIDNKAKHRN TQDGWEVGEL HMKTTTECHY LKRSIPLVYL YNSTSTGRAI YVLYCHVSKL MSAVVVDPFN GNELLPSALE RQFRDSCLEL
1501: SLDSLSWDGI RFQVHYVDHP EAAKKIIQRA ISEYREENCG PTVAVIECPD FTFMKEGIKA LDDFPCVRIP FNDDDNSYQP VSWQRPAAKI AMFRCAAAFQ
1601: WLDRRITQSR YAHVPLGNFG LDWLTFTIDI FLSRALRDQQ QVLWVSDNGV PDLGGINNEE AFFADEVQQT SLVFPGAYRK VSVELKIHNL AVNALLKSNL
1701: VNEMEGGGFM GFEQDVNPRG INSNDNTSFD ETTGCAQAFR VLKQLIHSCL TDVRKSKNIY ADSILQRLSW WLCSPSSKLH DPALHLMLHK VMQKVFALLL
1801: TDLRRLGAII IYADFSKVII DTVKFDLSAA KAYCESLLST VRNSDIFEWI LLEPVHYWHS LLFMDQYNYA GIRADDEISL DEVTIEPKWS VARHLPEYIE
1901: RDFIIIIAKF IFDPWKFAIE NKKGSSESLE AQMIEYLREQ IGSTFINMLV KKVDDIMSHM KEINVSDASR VSGQAPKGDY SLEFIQVISA VLALDQNVQQ
2001: DVLVMRKSLL KYIKVKECAA EAEFLDPGPS FILPNVACSN CDAYRDLDIC RDPALLTEKE WSCADTQCGK IYDREQMESS LLEMVRQRER MYHMQDVVCI
2101: RCNQVKAAHL TEQCECSGSF RCKESGSEFS KRMEIFMDIA KRQKFRLLEE YISWIIYGPS Y
0101: ELEAYLRRRY ERQVADIEIV EKEDLDLKNH LSGLQKKYLK ISFDTVQQLM EVKRDLLHIV ERNQAKFDAL EAYESILAGK REQRPQDCLD SIVDLREYDV
0201: PYHVRFAIDN DVRSGQWYNV SISSTDVILE KRTDLLQRAE VRVCAFDIET TKLPLKFPDA EYDQIMMISY MVDGQGFLII NRECVGEDVE DLEYTPKPEF
0301: EGYFKVTNVK NEVELLQRWF YHMQELKPGI YVTYNGDFFD WPFIERRASH HGIKMNEELG FRCDQNQGEC RAKFACHLDC FAWVKRDSYL PQGSHGLKAV
0401: TKAKLGYDPL EVNPEDMVRF AMEKPQTMAS YSVSDAVATY YLYMTYVNPF IFSLATIIPM VPDEVLRKGS GTLCEMLLMV EAYKANVVCP NKNQADPEKF
0501: YQNQLLESET YIGGHVECLE SGVFRSDIPT SFKLDSSAYQ QLIDNLGRDL EYAITVEGKM RMDSISNYDE VKDEIKEKLE KLRDDPIREE GPLIYHLDVA
0601: AMYPNIILTN RLQPPSIVTD EICTACDFNR PGKTCLRKLE WVWRGVTFMG KKSDYYHLKK QIESEFVDAG ANIMSSKSFL DLPKVDQQSK LKERLKKYCQ
0701: KAYKRVLDKP ITEVREAGIC MRENPFYVDT VRSFRDRRYE YKTLNKVWKG KLSEAKASGN SIKIQEAQDM VVVYDSLQLA HKCILNSFYG YVMRKGARWY
0801: SMEMAGVVTY TGAKIIQNAR LLIERIGKPL ELDTDGIWCC LPGSFPENFT FKTIDMKKLT ISYPCVMLNV DVAKNNTNDQ YQTLVDPVRK TYKSHSECSI
0901: EFEVDGPYKA MIIPASKEEG ILIKKRYAVF NHDGTLAELK GFEIKRRGEL KLIKVFQAEL FDKFLHGSTL EECYSAVAAV ADRWLDLLDN QGKDIADSEL
1001: LDYISESSTM SKSLADYGEQ KSCAVTTAKR LAEFLGVTMV KDKGLRCQYI VACEPKGTPV SERAVPVAIF TTNPEVMKFH LRKWCKTSSD VGIRLIIDWS
1101: YYKQRLSSAI QKVITIPAAM QKVANPVPRV LHPDWLHKKV REKDDKFRQR KLVDMFSSAN KDVVLDTDLP VTKDNVEDIE DFCKENRPSV KGPKPIARSY
1201: EVNKKQSECE QQESWDTEFH DISFQNIDKS VNYQGWLELK KRKWKVTLEK KKKRRLGDLR SSNQVDTHEI NQKVGQGRGG VGSYFRRPEE ALTSSHWQII
1301: QLVPSPQSGQ FFAWVVVEGL MLKIPLSIPR VFYINSKVPI DEYFQGKCVN KILPHGRPCY SLTEVKIQED QFKKESKKRA ALLADPGVEG IYETKVPLEF
1401: SAICQIGCVC KIDNKAKHRN TQDGWEVGEL HMKTTTECHY LKRSIPLVYL YNSTSTGRAI YVLYCHVSKL MSAVVVDPFN GNELLPSALE RQFRDSCLEL
1501: SLDSLSWDGI RFQVHYVDHP EAAKKIIQRA ISEYREENCG PTVAVIECPD FTFMKEGIKA LDDFPCVRIP FNDDDNSYQP VSWQRPAAKI AMFRCAAAFQ
1601: WLDRRITQSR YAHVPLGNFG LDWLTFTIDI FLSRALRDQQ QVLWVSDNGV PDLGGINNEE AFFADEVQQT SLVFPGAYRK VSVELKIHNL AVNALLKSNL
1701: VNEMEGGGFM GFEQDVNPRG INSNDNTSFD ETTGCAQAFR VLKQLIHSCL TDVRKSKNIY ADSILQRLSW WLCSPSSKLH DPALHLMLHK VMQKVFALLL
1801: TDLRRLGAII IYADFSKVII DTVKFDLSAA KAYCESLLST VRNSDIFEWI LLEPVHYWHS LLFMDQYNYA GIRADDEISL DEVTIEPKWS VARHLPEYIE
1901: RDFIIIIAKF IFDPWKFAIE NKKGSSESLE AQMIEYLREQ IGSTFINMLV KKVDDIMSHM KEINVSDASR VSGQAPKGDY SLEFIQVISA VLALDQNVQQ
2001: DVLVMRKSLL KYIKVKECAA EAEFLDPGPS FILPNVACSN CDAYRDLDIC RDPALLTEKE WSCADTQCGK IYDREQMESS LLEMVRQRER MYHMQDVVCI
2101: RCNQVKAAHL TEQCECSGSF RCKESGSEFS KRMEIFMDIA KRQKFRLLEE YISWIIYGPS Y
Arabidopsis Description
POL2ADNA polymerase epsilon catalytic subunit A [Source:UniProtKB/Swiss-Prot;Acc:F4HW04]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.