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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G139000.1 Wheat cytosol 99.51 99.51
TraesCS1A01G130700.1 Wheat nucleus 99.56 92.01
HORVU1Hr1G036500.57 Barley mitochondrion, nucleus 96.87 90.84
Os02t0511901-00 Rice nucleus 31.95 88.74
OQU85005 Sorghum nucleus 89.3 87.17
KRH18030 Soybean mitochondrion, plastid 5.57 85.07
Solyc11g067120.1.1 Tomato endoplasmic reticulum, plasma membrane 7.72 81.44
Zm00001d016581_P004 Maize nucleus 87.4 80.44
GSMUA_Achr9P17910_001 Banana nucleus 71.71 74.52
Solyc11g067130.1.1 Tomato nucleus 23.94 74.24
Os02t0511900-00 Rice nucleus 23.4 70.34
KRH25189 Soybean nucleus 69.57 64.46
KRH31260 Soybean cytosol, nucleus, plastid 68.39 63.55
VIT_06s0061g01610.t01 Wine grape nucleus 72.79 62.06
AT1G08260.1 Thale cress nucleus 65.17 61.73
Bra018641.1-P Field mustard nucleus 64.09 61.65
Solyc11g067140.1.1 Tomato mitochondrion, nucleus 27.99 61.48
CDX95079 Canola nucleus 64.19 61.37
KRG99612 Soybean cytosol 8.45 61.13
CDX93579 Canola nucleus 64.68 61.01
AT2G27120.2 Thale cress nucleus 62.77 60.02
TraesCS1B01G417700.1 Wheat endoplasmic reticulum, extracellular 3.66 60.0
Solyc11g067110.1.1 Tomato nucleus 10.31 48.73
GSMUA_Achr9P17920_001 Banana nucleus 2.15 18.97
Protein Annotations
KEGG:00230+2.7.7.7KEGG:00240+2.7.7.7Gene3D:1.10.132.60MapMan:13.2.3.3.1Gene3D:3.30.342.10Gene3D:3.30.420.10
ncoils:CoilInterPro:DNA-dir_DNA_pol_BInterPro:DNA-dir_DNA_pol_B_exonucInterPro:DNA-dir_DNA_pol_B_multi_domInterPro:DNA_pol_e_suA_CGO:GO:0000166
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003824GO:GO:0003887GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006259
GO:GO:0006260GO:GO:0006281GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0008270
GO:GO:0008622GO:GO:0009058GO:GO:0009987GO:GO:0016740InterPro:IPR036397PFAM:PF00136
PFAM:PF03104PFAM:PF08490InterPro:POL2PANTHER:PTHR10670InterPro:RNaseH-like_sfInterPro:RNaseH_sf
SMART:SM00486SMART:SM01159SUPFAM:SSF53098SUPFAM:SSF56672EnsemblPlantsGene:TraesCS1B01G156600EnsemblPlants:TraesCS1B01G156600.1
TIGR:cd05535TIGR:cd05779SEG:seg:::
Description
No Description!
Coordinates
chr1B:-:264342804..264365544
Molecular Weight (calculated)
233796.0 Da
IEP (calculated)
6.780
GRAVY (calculated)
-0.351
Length
2047 amino acids
Sequence
(BLAST)
0001: MRVRSDLMHV VEKNEEERDA VDAFESIYGV KRVERPQDYI NCIIDLREYD VPYHVRFAID NDVRSGQWYN VGVSGSDVLL QRREDLLQRA EVHVCAFDIE
0101: TTKLPLKFPD AEYDSVMMIS YMIDGQGYLI INRECVGEDI EDLEYTPKPE FEGHFRVKNV ADEVGLLKAW FSHMQEVKPG IYVTYNGDFF DWPFLEKRAA
0201: HHGIKMNEEI GFQCDSNQGE CRAKFSCHLD CFAWVKRDSY LPQGSQGLKA VTKAKLGYDP LEVNPEDMVR FAMEQPQTMA SYSVSDAVAT YYLYMTYVHP
0301: FIFSLATIIP MSPDEVLRKG SGTLCEMLLM VQAFQANIIC PNKHQADLEK FYNNRLVESE TYIGGHVECL ETGVFRSDLP TKFQLEPSAF EQLIENLDRD
0401: LQYAIAVEGK LDIDSVTNYD EVKDAIKQKL VSLRDHPTRE ECPLIYHLDV AAMYPNIILT NRLQPPSIVT DVDCTACDFN RPGKNCLRTL EWVWRGETYT
0501: AKKSDYHHIK RQIESEMIQT GGVTSSKPFL DLSKPEHLLK LKDRLKKYCQ KAYKRVVDKP ITEVREAGIC MRENSFYVDT VRSFRDRRYE YKGLNKTWKG
0601: KLSEAKASGN SIKIQEAQDM VVLYDSLQLA HKCILNSFYG YVMRKGARWY SMEMAGVVTY TGAKIIQNAR LLVDKIGRPL ELDTDGIWCV LPGSFPENFT
0701: FKTKAEKKLT ISYPCVMLNV DVARTNTNDQ YQTLKDPVSK LYTTNSECSI EFEVDGPYKA MILPASKEEG ILIKKRYAVF NEDGTLAELK GFEIKRRGEL
0801: KLIKVFQAEV FDKFLHGSTL EECYAAVASV ANRWLDLLDN QGIDISDSEL LGFISESSTM SKSLVDYGEQ KSCAVTTAKR LAEFLGDSMV KDKGLHCQYI
0901: VAREPQGTPV SERAVPVAIF ETDAEVAKFY LRKWCKVSTE ANIRFILDWS YYKQRLSSAI QKIITIPAAM QKISNPVPRV LHPDWLHKKV REKDDRFRQR
1001: KLRDMFSPLN KDMGMHNLNG TGDIEDLLTS DKGLRKATAS HSFNIGKENH PNGSPSAKAS LGHCKNQQKS VIRSNEPLRD DSADERVDRS TDYQGWLEAR
1101: KRKWKYVREQ KKRRRLGAAA SSEGPSNNLF SARNVSQLHG NGRNRSTFFQ KQELSLFRSH WQIIQLAPST LPGRFFAWVV ADGIMFKIPI NVPRVFYLNS
1201: KAPITDEFPG RRVKKILPHG KPSFNLIEVV TSEEQFRAEG RKLAAHLAEP DVEGIYETKI PLELNAILQI GCVCKVDKSA KKRNIQDGWD LAELQMKTTA
1301: EFSYLEQTVS FFYLYHSVSE GRAVYVMYFP TSLRVHAVVI NPFRNKELSP AFLEKQFRDA CQTPDPLHEN LTFQVDYHTS MDAGSKYVQR MLLEYRQQHP
1401: GPVIGIIECP KLQAIRESVR ALDDFPCVTI PCNARDNNYQ ALGWQATAGR TSMQRCAAST QWFNERISLA RYAHVPLGNF ELDWLLFTAD VFFSRALHDQ
1501: QQVLWISDDG IPDLGGTYEG DTCFADEVIQ PALTYPGAYR RISVELKIHH LAVNSLLKSS QVDEMEGGSI GNFENDIPPG PNATETDYND ASLCLPAFQV
1601: LKQLIQRCIS DAVSSGNVFA DAILQHLYRW LCSPRSRLHD PALHRLLHNV MKKVFALLLA EFRKLGANVI FANFSKIIID TGKVDLPSAR AYCDSLLKTL
1701: QTRDLFEWIE LEPLHYWHSL LFMDQYNYGG IQAKTQNVTS ADSSDGDDDI DIVSSWNIAE YLPKATQDHF VLIVSEFLYV PWKYMKEQVA CRAAMRDDTS
1801: CTPSITIMAA ENLEGQVVDY LRGQIGTYFA EKLLTIVSDI LLHFKGKGKS ESVGPSNSEL DPHLHKGDAA LEFIKHICAV LALDQNVQHD ILRMRKNLLK
1901: LVRVKEFAPE AQFQDPCASF ILPNVICSYC NDCRDLDLCR DSTLQGHEWR CAVPQCGQPY HREEMENALL QIVRQRERLY HLQDLVCVRC RQVKAAHVSE
2001: QCNCGGSFRC KEEAPQFLGK MRVFLNVAVS QKFELLQDCV RWILEVR
Best Arabidopsis Sequence Match ( AT1G08260.1 )
(BLAST)
0001: MSGDNRRRDR KDTRWSKKPK VVNTAEDELE SKLGFGLFSE GETRLGWLLT FSSSSWEDRD TGKVYSCVDL YFVTQDGFSF KTKYKFRPYF YAATKDKMEL
0101: ELEAYLRRRY ERQVADIEIV EKEDLDLKNH LSGLQKKYLK ISFDTVQQLM EVKRDLLHIV ERNQAKFDAL EAYESILAGK REQRPQDCLD SIVDLREYDV
0201: PYHVRFAIDN DVRSGQWYNV SISSTDVILE KRTDLLQRAE VRVCAFDIET TKLPLKFPDA EYDQIMMISY MVDGQGFLII NRECVGEDVE DLEYTPKPEF
0301: EGYFKVTNVK NEVELLQRWF YHMQELKPGI YVTYNGDFFD WPFIERRASH HGIKMNEELG FRCDQNQGEC RAKFACHLDC FAWVKRDSYL PQGSHGLKAV
0401: TKAKLGYDPL EVNPEDMVRF AMEKPQTMAS YSVSDAVATY YLYMTYVNPF IFSLATIIPM VPDEVLRKGS GTLCEMLLMV EAYKANVVCP NKNQADPEKF
0501: YQNQLLESET YIGGHVECLE SGVFRSDIPT SFKLDSSAYQ QLIDNLGRDL EYAITVEGKM RMDSISNYDE VKDEIKEKLE KLRDDPIREE GPLIYHLDVA
0601: AMYPNIILTN RLQPPSIVTD EICTACDFNR PGKTCLRKLE WVWRGVTFMG KKSDYYHLKK QIESEFVDAG ANIMSSKSFL DLPKVDQQSK LKERLKKYCQ
0701: KAYKRVLDKP ITEVREAGIC MRENPFYVDT VRSFRDRRYE YKTLNKVWKG KLSEAKASGN SIKIQEAQDM VVVYDSLQLA HKCILNSFYG YVMRKGARWY
0801: SMEMAGVVTY TGAKIIQNAR LLIERIGKPL ELDTDGIWCC LPGSFPENFT FKTIDMKKLT ISYPCVMLNV DVAKNNTNDQ YQTLVDPVRK TYKSHSECSI
0901: EFEVDGPYKA MIIPASKEEG ILIKKRYAVF NHDGTLAELK GFEIKRRGEL KLIKVFQAEL FDKFLHGSTL EECYSAVAAV ADRWLDLLDN QGKDIADSEL
1001: LDYISESSTM SKSLADYGEQ KSCAVTTAKR LAEFLGVTMV KDKGLRCQYI VACEPKGTPV SERAVPVAIF TTNPEVMKFH LRKWCKTSSD VGIRLIIDWS
1101: YYKQRLSSAI QKVITIPAAM QKVANPVPRV LHPDWLHKKV REKDDKFRQR KLVDMFSSAN KDVVLDTDLP VTKDNVEDIE DFCKENRPSV KGPKPIARSY
1201: EVNKKQSECE QQESWDTEFH DISFQNIDKS VNYQGWLELK KRKWKVTLEK KKKRRLGDLR SSNQVDTHEI NQKVGQGRGG VGSYFRRPEE ALTSSHWQII
1301: QLVPSPQSGQ FFAWVVVEGL MLKIPLSIPR VFYINSKVPI DEYFQGKCVN KILPHGRPCY SLTEVKIQED QFKKESKKRA ALLADPGVEG IYETKVPLEF
1401: SAICQIGCVC KIDNKAKHRN TQDGWEVGEL HMKTTTECHY LKRSIPLVYL YNSTSTGRAI YVLYCHVSKL MSAVVVDPFN GNELLPSALE RQFRDSCLEL
1501: SLDSLSWDGI RFQVHYVDHP EAAKKIIQRA ISEYREENCG PTVAVIECPD FTFMKEGIKA LDDFPCVRIP FNDDDNSYQP VSWQRPAAKI AMFRCAAAFQ
1601: WLDRRITQSR YAHVPLGNFG LDWLTFTIDI FLSRALRDQQ QVLWVSDNGV PDLGGINNEE AFFADEVQQT SLVFPGAYRK VSVELKIHNL AVNALLKSNL
1701: VNEMEGGGFM GFEQDVNPRG INSNDNTSFD ETTGCAQAFR VLKQLIHSCL TDVRKSKNIY ADSILQRLSW WLCSPSSKLH DPALHLMLHK VMQKVFALLL
1801: TDLRRLGAII IYADFSKVII DTVKFDLSAA KAYCESLLST VRNSDIFEWI LLEPVHYWHS LLFMDQYNYA GIRADDEISL DEVTIEPKWS VARHLPEYIE
1901: RDFIIIIAKF IFDPWKFAIE NKKGSSESLE AQMIEYLREQ IGSTFINMLV KKVDDIMSHM KEINVSDASR VSGQAPKGDY SLEFIQVISA VLALDQNVQQ
2001: DVLVMRKSLL KYIKVKECAA EAEFLDPGPS FILPNVACSN CDAYRDLDIC RDPALLTEKE WSCADTQCGK IYDREQMESS LLEMVRQRER MYHMQDVVCI
2101: RCNQVKAAHL TEQCECSGSF RCKESGSEFS KRMEIFMDIA KRQKFRLLEE YISWIIYGPS Y
Arabidopsis Description
POL2ADNA polymerase epsilon catalytic subunit A [Source:UniProtKB/Swiss-Prot;Acc:F4HW04]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.