Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G419400.1 | Wheat | cytosol | 98.46 | 98.46 |
| TraesCS1B01G449500.1 | Wheat | cytoskeleton, cytosol, nucleus | 99.49 | 96.04 |
| Zm00001d009440_P001 | Maize | cytoskeleton, cytosol, nucleus | 91.28 | 88.56 |
| EES19889 | Sorghum | cytoskeleton, cytosol, nucleus | 90.77 | 88.06 |
| TraesCS6D01G354500.1 | Wheat | cytosol | 91.79 | 87.75 |
| Os05t0579800-01 | Rice | cytosol | 90.26 | 87.56 |
| GSMUA_Achr1P03050_001 | Banana | cytosol | 85.13 | 85.13 |
| Zm00001d038881_P001 | Maize | cytoskeleton, cytosol, nucleus | 86.15 | 84.85 |
| HORVU1Hr1G091550.1 | Barley | cytosol, nucleus | 96.92 | 82.89 |
| TraesCS1D01G323600.1 | Wheat | nucleus | 28.72 | 37.09 |
Protein Annotations
| MapMan:13.3.4.1.1.3.2 | Gene3D:2.60.120.260 | InterPro:APC10/Doc1 | InterPro:APC_su10/DOC_dom | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031145 | InterPro:Galactose-bd-like_sf | InterPro:IPR004939 | InterPro:IPR008979 |
| PFAM:PF03256 | PIRSF:PIRSF028841 | PFscan:PS51284 | PANTHER:PTHR12936 | SMART:SM01337 | SUPFAM:SSF49785 |
| EnsemblPlantsGene:TraesCS1D01G427200 | EnsemblPlants:TraesCS1D01G427200.2 | TIGR:cd08366 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1D:+:479773441..479775730
Molecular Weight (calculated)
21760.0 Da
IEP (calculated)
6.953
GRAVY (calculated)
-0.350
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDGEEEAA AAPAAGRLKG CPELSVEGDM REMAKTAAWS VSSCKPGNGV ASLRDDSLDT YWQSDGAQPH LVNIQFQKKV QLQLVVLYVD FKLDESYTPS
101: KISIRAGDGF HNLKEIKTVD LLKPVGWVHI SLSGTDPRET FIHTFMLQIA VLANHLNGRD THVRQIKIYG PRPNPVPHQP FHFTSRECIM YSTIR
101: KISIRAGDGF HNLKEIKTVD LLKPVGWVHI SLSGTDPRET FIHTFMLQIA VLANHLNGRD THVRQIKIYG PRPNPVPHQP FHFTSRECIM YSTIR
001: MATESSESEE EGKISGGNYK LIIDDDLREM GKNAAWSVSS CKPGNGVTTL RDDNLETYWQ SDGLQPHLIN IQFQKKVKLQ LVVLYVDFKL DESYTPSKIS
101: IRAGDGFHNL KEIKSVELVK PTGWVCLSLS GTDPRETFVN TFMLQIAILS NHLNGRDTHI RQIKVYGPRP NPIPHQPFQF TSMEFLTYST LR
101: IRAGDGFHNL KEIKSVELVK PTGWVCLSLS GTDPRETFVN TFMLQIAILS NHLNGRDTHI RQIKVYGPRP NPIPHQPFQF TSMEFLTYST LR
Arabidopsis Description
APC10Anaphase-promoting complex subunit 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPW2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.