Factsheet for TraesCS2A01G467700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi

Predictor Summary:

peroxisome 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	peroxisome
YLoc:	peroxisome

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G467700.1	Wheat	peroxisome	99.73	99.73
TraesCS2B01G490700.1	Wheat	peroxisome	99.19	99.19
Os04t0623500-02	Rice	peroxisome	89.16	89.65
Zm00001d002261_P003	Maize	mitochondrion	89.97	83.21
GSMUA_Achr6P19880_001	Banana	peroxisome	80.49	80.49
EES11443	Sorghum	peroxisome	89.16	79.28
TraesCS2A01G250800.1	Wheat	peroxisome	78.59	78.8
TraesCS5A01G424400.1	Wheat	peroxisome	75.34	75.14
TraesCS2A01G168400.1	Wheat	peroxisome	58.54	59.02
TraesCS5A01G266500.2	Wheat	peroxisome	54.47	54.92

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	InterPro:FMN-dep_DH	InterPro:FMN_HAD
InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396
PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF70
SUPFAM:SSF51395	EnsemblPlantsGene:TraesCS2A01G467700	EnsemblPlants:TraesCS2A01G467700.1	TIGR:cd02809	SEG:seg	:

Description

No Description!

Coordinates

chr2A:+:711968244..711971470

Molecular Weight (calculated)

40723.5 Da

IEP (calculated)

8.058

GRAVY (calculated)

0.004

Length

369 amino acids

Sequence
(BLAST)

001: MGMEMITNVS EYERLAKEKL PKMVYDYYAS GAEDQWTLNE NREAFSRILF RPRVLIDVSH INMATNILGF DVSMPIMIAP TAMQKMAHPE GELATARAAA
101: SAGTIMTLSS WATSSVERVN SVGPGIRFFQ LYVYKDRNIV RQLVKRAEMA GFKAIALTVD TPRLGRREAD IKNRFNLPPH LVLENFAALD LGKMDKTDDS
201: GLASYVASQV DQSLCWEDVK WLQTITSLPI LVKGVMTAED TRIAIEYGAA GIIVSNHGAR QLDYVPATIS CLEEVVREAK GRLPVFLDGG VRRGTDVFKA
301: LALGAAGVFI GRPVLYSLAV DGEAGVRKVL QMLRDELELA MALSGCPSLR DITRAHVVTD GDRIRRARL

Best Arabidopsis Sequence Match ( AT4G18360.1 )
(BLAST)

001: MEITNVMEYE KIAKEKLPKM VYDYYASGAE DQWTLQENRN AFSRILFRPR ILIDVSKIDV STTVLGFNIS MPIMIAPTAM QKMAHPDGEL ATARATSAAG
101: TIMTLSSWAT CSVEEVASTG PGIRFFQLYV YKDRNVVIQL VKRAEEAGFK AIALTVDTPR LGRRESDIKN RFALPRGLTL KNFEGLDLGK IDKTNDSGLA
201: SYVAGQVDQS LSWKDIKWLQ SITSLPILVK GVITAEDARI AVEYGAAGII VSNHGARQLD YVPATIVALE EVVKAVEGRI PVFLDGGVRR GTDVFKALAL
301: GASGVFVGRP SLFSLAADGE AGVRKMLQML RDEFELTMAL SGCRSLREIS RTHIKTDWDT PHYLSAKL

Arabidopsis Description

GLO5Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [Source:UniProtKB/Swiss-Prot;Acc:O49506]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.