CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002261_P003	Maize	mitochondrion	89.88	93.48
Os04t0623500-02	Rice	peroxisome	81.69	92.37
TraesCS2A01G467700.1	Wheat	golgi, peroxisome	79.28	89.16
TraesCS2D01G467700.1	Wheat	peroxisome	79.04	88.89
TraesCS2B01G490700.1	Wheat	peroxisome	78.8	88.62
GSMUA_Achr6P19880_001	Banana	peroxisome	73.73	82.93
KXG34415	Sorghum	peroxisome	73.01	82.11
EER93339	Sorghum	peroxisome	71.57	80.71
EES11447	Sorghum	peroxisome	67.47	76.29
OQU90257	Sorghum	peroxisome	52.29	59.13
OQU90259	Sorghum	peroxisome	50.36	56.79

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	EntrezGene:8074729	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	UniProt:C5YG56
EnsemblPlants:EES11443	ProteinID:EES11443	ProteinID:EES11443.2	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010181	GO:GO:0016020	GO:GO:0016491	GO:GO:0055114
InterPro:IPR013785	InterPro:IPR037396	PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349
PANTHER:PTHR10578	PANTHER:PTHR10578:SF70	SMART:SM01240	EnsemblPlantsGene:SORBI_3006G220500	SUPFAM:SSF51395	unigene:Sbi.16866
UniParc:UPI00081AE559	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:56741901..56746454

Molecular Weight (calculated)

45644.3 Da

IEP (calculated)

8.456

GRAVY (calculated)

-0.108

Length

415 amino acids

Sequence
(BLAST)

001: MTPSDLTECL NTHTGTPRDP CSNPPLHSKS HGQPSQPRPT PLPLCVRDME LITNVTEYEK LAKEKLPKMV YDYYASGAED QWTLKENREA FSRILFRPRV
101: LIDVSRIDMA TNVLGFNISM PIMIAPSAMQ KMAHPDGELA TARAAASAGT IMTLSSWSTS SVDEVNSVGP GIRFFQLYVY KDRNIVRQLV KRAEMAGFKA
201: IALTVDTPIL GRREADIKNR FTLPPHLTLK NFEALDLGTM DKTNDSGLAS YVAGQVDRTL SWKDIKWLQT ITSLPILVKG VVTAEDTRLA IEYGAAGIIV
301: SNHGARQLDY VPATISCLEE VVREAKGRLP VFLDGGVRRG TDVFKALALG ASGVFIGRPV LFSLAVDGEA GVRKVLQMLR DELELTMALS GCTSLREITR
401: AHVITDSDRI GRSRL

Best Arabidopsis Sequence Match ( AT4G18360.1 )
(BLAST)

001: MEITNVMEYE KIAKEKLPKM VYDYYASGAE DQWTLQENRN AFSRILFRPR ILIDVSKIDV STTVLGFNIS MPIMIAPTAM QKMAHPDGEL ATARATSAAG
101: TIMTLSSWAT CSVEEVASTG PGIRFFQLYV YKDRNVVIQL VKRAEEAGFK AIALTVDTPR LGRRESDIKN RFALPRGLTL KNFEGLDLGK IDKTNDSGLA
201: SYVAGQVDQS LSWKDIKWLQ SITSLPILVK GVITAEDARI AVEYGAAGII VSNHGARQLD YVPATIVALE EVVKAVEGRI PVFLDGGVRR GTDVFKALAL
301: GASGVFVGRP SLFSLAADGE AGVRKMLQML RDEFELTMAL SGCRSLREIS RTHIKTDWDT PHYLSAKL

Arabidopsis Description

GLO5Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [Source:UniProtKB/Swiss-Prot;Acc:O49506]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.