Factsheet for TraesCS2B01G490700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G467700.1	Wheat	golgi, peroxisome	99.19	99.19
TraesCS2D01G467700.1	Wheat	peroxisome	98.92	98.92
Os04t0623500-02	Rice	peroxisome	88.35	88.83
Zm00001d002261_P003	Maize	mitochondrion	89.43	82.71
GSMUA_Achr6P19880_001	Banana	peroxisome	80.49	80.49
EES11443	Sorghum	peroxisome	88.62	78.8
TraesCS2B01G264100.2	Wheat	peroxisome, plastid	78.59	77.13
TraesCS5B01G426500.1	Wheat	golgi	74.8	74.59
TraesCS5B01G266100.1	Wheat	peroxisome	55.01	55.62
TraesCS2B01G194600.3	Wheat	peroxisome	40.11	37.85

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	InterPro:FMN-dep_DH	InterPro:FMN_HAD
InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396
PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF70
SUPFAM:SSF51395	EnsemblPlantsGene:TraesCS2B01G490700	EnsemblPlants:TraesCS2B01G490700.1	TIGR:cd02809	SEG:seg	:

Description

No Description!

Coordinates

chr2B:+:688430739..688433903

Molecular Weight (calculated)

40708.6 Da

IEP (calculated)

7.550

GRAVY (calculated)

0.029

Length

369 amino acids

Sequence
(BLAST)

001: MGMEMITNVS EYERLAKEKL PKMVYDYYAS GAEDQWTLNE NREAFSRILF RPRVLIDVTH INMATNILGF DVSMPIMIAP TAMQKMAHPE GELATARAAA
101: SAGTIMTLSS WATSSVERVN SVGPGIRFFQ LYVYKDRNIV RQLVKRAEMA GFKAIALTVD TPRLGRREAD IKNRFILPPH LVLENFAALD LGKMDKTDDS
201: GLASYVASQV DQSLCWEDVK WLQTITSLPI LVKGVMTAED TRIAIEYGAA GIIVSNHGAR QLDYVPATIS CLEEVVREAK GQLPVFLDGG VRRGTDVFKA
301: LALGAAGVFI GRPVLYSLAV DGEAGVRKVL QMLRDELELA MALSGCPSLR DITRAHVVTD GDRIRRARL

Best Arabidopsis Sequence Match ( AT3G14420.1 )
(BLAST)

001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL

Arabidopsis Description

GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.