Factsheet for TraesCS5B01G266100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G274300.1	Wheat	peroxisome	95.89	95.63
TraesCS5A01G266500.2	Wheat	peroxisome	91.23	90.98
HORVU2Hr1G030930.2	Barley	peroxisome	87.4	87.16
OQU90257	Sorghum	peroxisome	83.84	83.38
OQU90259	Sorghum	peroxisome	81.1	80.43
Os07t0616500-01	Rice	peroxisome	80.27	80.05
GSMUA_Achr3P01940_001	Banana	peroxisome	68.49	68.68
Zm00001d006868_P007	Maize	peroxisome	76.71	66.04
VIT_09s0002g00810.t01	Wine grape	peroxisome	62.47	62.64
Solyc03g122130.2.1	Tomato	peroxisome	58.63	62.39
AT3G14130.1	Thale cress	peroxisome	61.64	61.98
Bra021533.1-P	Field mustard	peroxisome	61.37	61.71
PGSC0003DMT400058960	Potato	peroxisome	61.37	61.54
Solyc03g122170.2.1	Tomato	peroxisome	57.26	60.93
AT3G14150.1	Thale cress	peroxisome	60.55	60.88
Solyc03g122140.2.1	Tomato	peroxisome	60.55	60.88
PGSC0003DMT400058920	Potato	peroxisome	60.55	60.88
PGSC0003DMT400058959	Potato	peroxisome	60.55	60.71
Bra021535.1-P	Field mustard	peroxisome	60.27	60.61
Bra001536.1-P	Field mustard	peroxisome	59.73	60.39
TraesCS2B01G194600.3	Wheat	peroxisome	62.74	58.57
CDX98452	Canola	cytosol, nucleus, peroxisome	4.66	56.67
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	63.56	55.77
TraesCS5B01G426500.1	Wheat	golgi	56.16	55.41
TraesCS2B01G264100.2	Wheat	peroxisome, plastid	56.99	55.32
TraesCS2B01G490700.1	Wheat	peroxisome	55.62	55.01
PGSC0003DMT400058950	Potato	peroxisome	55.34	53.58
Bra036980.1-P	Field mustard	peroxisome	8.22	52.63
Solyc03g122150.2.1	Tomato	peroxisome	18.9	45.1
KRH25749	Soybean	vacuole	6.85	29.76
Bra027370.1-P	Field mustard	vacuole	58.36	21.28

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	InterPro:FMN-dep_DH	InterPro:FMN_HAD
InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396
PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF67
SMART:SM01240	SUPFAM:SSF51395	EnsemblPlantsGene:TraesCS5B01G266100	EnsemblPlants:TraesCS5B01G266100.1	TIGR:cd02809	:

Description

No Description!

Coordinates

chr5B:+:450758883..450767418

Molecular Weight (calculated)

39771.4 Da

IEP (calculated)

9.097

GRAVY (calculated)

-0.042

Length

365 amino acids

Sequence
(BLAST)

001: MENNLPVNIR EYQELAKKAL SKMHYDYING GAEDEHTLRD NIAAYGRILL RPRVLVDVSN IDMSTSLLGY NMPSPIIVAP TGSHNSKPRR EVATAKAAAS
101: CNSLMVLSFS SNCRIEEVAA SCDAIRFYQL YVFKKRAVSA TLVRRAESNG FKAIVLTVDN PMLGRRERDI RNKMVAPAKP NLEGLISLEN LDTTDGSQLV
201: KYVRDTMDPS LSWKDVEWLK SITSLPILLK GILTAEDARK AVEAGVAGVI VSNHGGRQLD YAPATISVLE EVVKAVAGAV PVLVDGGIRR GTDVLKALAL
301: GARGVMVGRP VMYGLAARGE AGAKHVIEML NRELELAMAL CGCRSLAEIT RDRVQTEGDR IRSLL

Best Arabidopsis Sequence Match ( AT3G14130.1 )
(BLAST)

001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.