Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35448 | Canola | peroxisome | 43.14 | 58.41 |
| CDY13160 | Canola | peroxisome | 43.14 | 58.41 |
| KRH25749 | Soybean | vacuole | 22.22 | 40.48 |
| Solyc03g122140.2.1 | Tomato | peroxisome | 68.63 | 28.93 |
| PGSC0003DMT400058950 | Potato | peroxisome | 69.93 | 28.38 |
| VIT_09s0002g00810.t01 | Wine grape | peroxisome | 62.09 | 26.1 |
| Solyc03g122130.2.1 | Tomato | peroxisome | 54.25 | 24.2 |
| Solyc03g122170.2.1 | Tomato | peroxisome | 51.63 | 23.03 |
| CDX75747 | Canola | peroxisome | 54.25 | 22.86 |
| CDY33247 | Canola | peroxisome | 54.25 | 22.86 |
| Bra021535.1-P | Field mustard | peroxisome | 53.59 | 22.59 |
| VIT_09s0002g00820.t01 | Wine grape | peroxisome, plastid | 60.78 | 22.36 |
| Bra021533.1-P | Field mustard | peroxisome | 52.94 | 22.31 |
| CDY39100 | Canola | peroxisome | 52.29 | 22.28 |
| GSMUA_Achr3P01940_001 | Banana | peroxisome | 52.94 | 22.25 |
| CDY52265 | Canola | peroxisome | 52.29 | 22.16 |
| AT3G14150.1 | Thale cress | peroxisome | 52.29 | 22.04 |
| AT3G14130.1 | Thale cress | peroxisome | 52.29 | 22.04 |
| CDX82499 | Canola | peroxisome | 51.63 | 21.88 |
| Bra001536.1-P | Field mustard | peroxisome | 51.63 | 21.88 |
| Os07t0616500-01 | Rice | peroxisome | 49.67 | 20.77 |
| CDY52266 | Canola | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 50.33 | 20.75 |
| HORVU2Hr1G030930.2 | Barley | peroxisome | 49.02 | 20.49 |
| TraesCS2D01G175900.1 | Wheat | peroxisome | 49.02 | 20.49 |
| OQU90257 | Sorghum | peroxisome | 48.37 | 20.16 |
| TraesCS5D01G274300.1 | Wheat | peroxisome | 47.71 | 19.95 |
| TraesCS2A01G168400.1 | Wheat | peroxisome | 47.71 | 19.95 |
| Solyc07g056540.2.1 | Tomato | plastid | 47.71 | 19.68 |
| TraesCS5A01G266500.2 | Wheat | peroxisome | 47.06 | 19.67 |
| Solyc10g007600.2.1 | Tomato | plastid | 46.41 | 19.14 |
| OQU90259 | Sorghum | peroxisome | 45.75 | 19.02 |
| TraesCS5B01G266100.1 | Wheat | peroxisome | 45.1 | 18.9 |
| Solyc08g048250.2.1 | Tomato | nucleus | 46.41 | 18.73 |
| CDY39098 | Canola | peroxisome | 41.18 | 18.58 |
| TraesCS2B01G194600.3 | Wheat | peroxisome | 43.79 | 17.14 |
| Zm00001d006868_P007 | Maize | peroxisome | 47.06 | 16.98 |
| CDX97546 | Canola | peroxisome | 52.29 | 11.14 |
| Solyc03g122160.1.1 | Tomato | cytosol, nucleus, peroxisome | 7.19 | 10.58 |
| Bra036980.1-P | Field mustard | peroxisome | 3.27 | 8.77 |
| CDY49371 | Canola | peroxisome | 3.27 | 8.62 |
| Bra027370.1-P | Field mustard | vacuole | 52.29 | 7.99 |
| HORVU6Hr1G051600.1 | Barley | peroxisome, plastid | 5.88 | 7.89 |
| Zm00001d023759_P001 | Maize | mitochondrion, nucleus, peroxisome | 11.76 | 6.92 |
| Os03t0786000-01 | Rice | plastid | 11.11 | 6.3 |
| Zm00001d024312_P001 | Maize | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 1.31 | 1.68 |
Protein Annotations
| EnsemblPlants:Solyc03g122150.2.1 | EnsemblPlantsGene:Solyc03g122150.2 | Gene3D:3.20.20.70 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Aldolase_TIM | InterPro:FMN-dep_DH | InterPro:FMN_HAD |
| InterPro:IPR013785 | InterPro:IPR037396 | PANTHER:PTHR10578 | PANTHER:PTHR10578:SF67 | PFAM:PF01070 | PFscan:PS51349 |
| SEG:seg | SUPFAM:SSF51395 | UniParc:UPI00027657D5 | UniProt:K4BN13 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3:+:70085792..70086717
Molecular Weight (calculated)
17018.5 Da
IEP (calculated)
5.515
GRAVY (calculated)
0.224
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEPVDVNE FEELARQVLP KISYDFFSGG AEDQHTLKQN IEAFHRIIIQ PTILVDVSRI DMSTVILSHK TSAPIMIAPT MMHKFAHPEG EIATARGAAS
101: CNVIAGLSFT CKAVRVIQNF VTYYYSQLSL SSYVNNDFSC FATDTVLLFF LCQ
101: CNVIAGLSFT CKAVRVIQNF VTYYYSQLSL SSYVNNDFSC FATDTVLLFF LCQ
001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML
Arabidopsis Description
GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.