CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82499	Canola	peroxisome	91.18	91.69
CDY33247	Canola	peroxisome	85.95	85.95
AT3G14150.1	Thale cress	peroxisome	85.4	85.4
CDY39100	Canola	peroxisome	83.47	84.4
CDY39098	Canola	peroxisome	78.79	84.37
CDY35448	Canola	peroxisome	26.17	84.07
AT3G14130.1	Thale cress	peroxisome	83.47	83.47
CDY13160	Canola	peroxisome	25.62	82.3
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	83.2	81.4
CDY52265	Canola	peroxisome	78.51	78.95
VIT_09s0002g00810.t01	Wine grape	peroxisome	74.66	74.45
PGSC0003DMT400058959	Potato	peroxisome	72.45	72.25
Solyc03g122170.2.1	Tomato	peroxisome	68.04	72.01
Solyc03g122130.2.1	Tomato	peroxisome	66.12	69.97
PGSC0003DMT400058920	Potato	peroxisome	69.7	69.7
PGSC0003DMT400058960	Potato	peroxisome	69.42	69.23
Solyc03g122140.2.1	Tomato	peroxisome	69.15	69.15
CDY49371	Canola	peroxisome	11.02	68.97
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	74.38	64.9
PGSC0003DMT400058950	Potato	peroxisome	63.91	61.54
CDX96897	Canola	peroxisome	28.93	60.34
CDY40892	Canola	peroxisome	28.1	58.96
CDX82483	Canola	peroxisome	60.33	58.71
CDX98453	Canola	peroxisome	59.78	58.65
CDX97574	Canola	peroxisome	59.78	58.65
CDX82484	Canola	peroxisome	59.23	58.58
CDY39115	Canola	peroxisome	59.23	58.58
CDX75771	Canola	peroxisome	59.23	58.58
CDY25425	Canola	peroxisome	57.58	58.54
CDY33220	Canola	peroxisome	57.58	58.54
CDX81437	Canola	peroxisome	57.58	58.54
CDX68646	Canola	peroxisome	57.58	58.54
CDY33221	Canola	peroxisome	58.95	58.31
CDY39114	Canola	peroxisome	58.95	58.31
CDY55631	Canola	peroxisome	58.4	57.61
CDY01535	Canola	peroxisome	58.13	57.34
CDX78843	Canola	peroxisome	57.58	56.79
CDX99474	Canola	peroxisome	57.02	56.25
CDX81438	Canola	peroxisome	47.66	55.63
CDY40891	Canola	peroxisome	47.66	55.63
CDY16268	Canola	peroxisome	47.66	55.63
CDY11082	Canola	peroxisome	47.66	55.63
CDX98451	Canola	peroxisome	46.01	54.58
Solyc03g122150.2.1	Tomato	peroxisome	22.86	54.25
CDX97573	Canola	peroxisome	56.75	54.07
CDY25424	Canola	peroxisome	49.31	53.43
CDY35618	Canola	peroxisome	49.04	52.82
CDX68645	Canola	peroxisome	49.04	52.82
CDX75772	Canola	mitochondrion	35.54	44.79
CDX98452	Canola	cytosol, nucleus, peroxisome	3.58	43.33
CDX88442	Canola	cytosol, mitochondrion, plastid	13.5	41.88
CDY70372	Canola	cytosol, mitochondrion, plastid	13.5	41.88
CDX97546	Canola	peroxisome	79.06	39.97
CDY52449	Canola	mitochondrion	21.76	36.24
CDX86782	Canola	cytosol, peroxisome, plastid	22.04	35.87

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	GO:A0A078CG32	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	EnsemblPlants:CDX75747
ProteinID:CDX75747	ProteinID:CDX75747.1	ncoils:Coil	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00123674001	InterPro:IPR013785	InterPro:IPR037396
PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF67
SUPFAM:SSF51395	UniParc:UPI0004EDF029	SEG:seg	:	:	:

Description

BnaC03g38300D

Coordinates

chrLK031805:-:324638..327115

Molecular Weight (calculated)

39675.3 Da

IEP (calculated)

8.582

GRAVY (calculated)

0.017

Length

363 amino acids

Sequence
(BLAST)

001: MDQIVNVNEF QELARQALPK MYYDFYSGGA EDQHTLKENM EAFSRIMFRP RVLVDVTKID MSTRILGYPL SAPIMIAPTG SHGLAHPEGE TATAKAAAAC
101: NTIMIVSSMS SCTLEEVASS CNAVRFFQLY VFERRDVSAQ VVRRAERAGY KAIVLTVDVP KLGRREADIK NKMIAPKLWN FEGLFSTKVK PSDGSGVEAL
201: ASRALDASLN WKDIEWLRSI TKLPILIKGI LTREDALKAV EAGVDGIIVS NHGGRQLDYS PATITVLEEV VHVVKGRIPV LLDGGVRRGT DVFKALALGA
301: KAVLIGRPVV YGLAAKGGDG VMKVIEMLKN EFELTLALSG CATIGDITRN HVRTEDERLK SNL

Best Arabidopsis Sequence Match ( AT3G14150.2 )
(BLAST)

001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSKID MSTKILGYPI SAPIMIAPTG NHKLAHPEGE TATAKAAAAC
101: NTIMIVSYMS SCTFEEIASS CNAVRFLQIY VYKRRDITAQ VVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLFSTEVR PSKGSGVQAF
201: ASRAFDASFS WKDIEWLRSI TELPILVKGI LTREDALKAV EAGVDGIIVS NHGGRQLDYS PATITVLEEV VQVVRGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPII YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDITRN HVRTENERLH SML

Arabidopsis Description

GLO3HAOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC7]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.