CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39098	Canola	peroxisome	90.08	96.46
CDY39100	Canola	peroxisome	94.77	95.82
AT3G14130.1	Thale cress	peroxisome	90.08	90.08
CDX82499	Canola	peroxisome	88.43	88.92
AT3G14150.1	Thale cress	peroxisome	88.71	88.71
CDY13160	Canola	peroxisome	27.55	88.5
CDY35448	Canola	peroxisome	27.55	88.5
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	88.15	86.25
CDX75747	Canola	peroxisome	85.95	85.95
CDY52265	Canola	peroxisome	80.72	81.16
VIT_09s0002g00810.t01	Wine grape	peroxisome	75.48	75.27
Solyc03g122170.2.1	Tomato	peroxisome	70.25	74.34
CDY49371	Canola	peroxisome	11.85	74.14
PGSC0003DMT400058959	Potato	peroxisome	73.55	73.35
Solyc03g122130.2.1	Tomato	peroxisome	67.22	71.14
PGSC0003DMT400058960	Potato	peroxisome	70.52	70.33
PGSC0003DMT400058920	Potato	peroxisome	68.59	68.59
Solyc03g122140.2.1	Tomato	peroxisome	67.49	67.49
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	75.21	65.62
CDX96897	Canola	peroxisome	31.13	64.94
PGSC0003DMT400058950	Potato	peroxisome	63.64	61.27
CDX81437	Canola	peroxisome	59.5	60.5
CDX68646	Canola	peroxisome	59.5	60.5
CDY25425	Canola	peroxisome	59.5	60.5
CDX75771	Canola	peroxisome	61.16	60.49
CDX82484	Canola	peroxisome	61.16	60.49
CDY33221	Canola	peroxisome	60.88	60.22
CDY39114	Canola	peroxisome	60.88	60.22
CDY39115	Canola	peroxisome	60.61	59.95
CDY33220	Canola	peroxisome	58.95	59.94
CDY40892	Canola	peroxisome	28.37	59.54
CDX82483	Canola	peroxisome	61.16	59.52
CDX98453	Canola	peroxisome	60.61	59.46
CDX97574	Canola	peroxisome	60.61	59.46
CDY55631	Canola	peroxisome	60.06	59.24
CDX78843	Canola	peroxisome	60.06	59.24
CDY01535	Canola	peroxisome	59.78	58.97
CDX99474	Canola	peroxisome	59.5	58.7
CDY40891	Canola	peroxisome	47.93	55.95
CDY11082	Canola	peroxisome	47.93	55.95
CDX81438	Canola	peroxisome	47.93	55.95
CDY16268	Canola	peroxisome	47.93	55.95
CDX97573	Canola	peroxisome	57.58	54.86
CDX98451	Canola	peroxisome	46.01	54.58
Solyc03g122150.2.1	Tomato	peroxisome	22.86	54.25
CDY25424	Canola	peroxisome	49.59	53.73
CDX68645	Canola	peroxisome	49.31	53.12
CDY35618	Canola	peroxisome	49.31	53.12
CDX98452	Canola	cytosol, nucleus, peroxisome	3.86	46.67
CDX75772	Canola	mitochondrion	36.09	45.49
CDY70372	Canola	cytosol, mitochondrion, plastid	13.77	42.73
CDX88442	Canola	cytosol, mitochondrion, plastid	13.77	42.73
CDX97546	Canola	peroxisome	81.82	41.36
CDY52449	Canola	mitochondrion	21.76	36.24
CDX86782	Canola	cytosol, peroxisome, plastid	22.04	35.87

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	GO:A0A078H749	UniProt:A0A078H749	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN
EnsemblPlants:CDY33247	ProteinID:CDY33247	ProteinID:CDY33247.1	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00054009001	InterPro:IPR013785	InterPro:IPR037396
PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF67
SMART:SM01240	SUPFAM:SSF51395	UniParc:UPI0004EEF5BD	SEG:seg	:	:

Description

BnaC01g37200DBnaC01g37200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H749]

Coordinates

chrLK032309:+:349486..351970

Molecular Weight (calculated)

39926.8 Da

IEP (calculated)

7.971

GRAVY (calculated)

0.040

Length

363 amino acids

Sequence
(BLAST)

001: MDQIVNVNEF QELAKRALPK MYYDFYSGGA EDQHTLKENV EAFTRIMFRP RVLVDVSKID MSTRILGYPI SAPIMIAPTA MHMLAHPQGE TATAKAAAAC
101: NTIMIVSYMA SCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP KLGRREADIK NKMVSPQLRN FEGLFSTEVL PSEGSGLEAF
201: ASSTFDASLN WKDIEWLRSI TKLPILVKGI LTREDALKTI EAGVDGIVVS NHGARQLDYS PATITVLEEI VHVVGGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPVV YGLAAKGEDG VRKVIDMLKN ELELTMALSG CPTIDDITRN HVRTENERLK SML

Best Arabidopsis Sequence Match ( AT3G14130.1 )
(BLAST)

001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.