CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52449	Canola	mitochondrion	95.07	97.25
CDY70372	Canola	cytosol, mitochondrion, plastid	23.77	45.3
CDX88442	Canola	cytosol, mitochondrion, plastid	23.77	45.3
CDY11082	Canola	peroxisome	58.3	41.8
CDY40891	Canola	peroxisome	58.3	41.8
CDY16268	Canola	peroxisome	58.3	41.8
CDX81438	Canola	peroxisome	58.3	41.8
CDX98451	Canola	peroxisome	54.71	39.87
CDY25424	Canola	peroxisome	58.3	38.81
CDX68645	Canola	peroxisome	58.3	38.58
CDY35618	Canola	peroxisome	58.3	38.58
HORVU0Hr1G013900.4	Barley	peroxisome	52.47	35.78
CDY25425	Canola	peroxisome	56.5	35.29
CDX68646	Canola	peroxisome	56.5	35.29
CDX81437	Canola	peroxisome	56.5	35.29
CDX75772	Canola	mitochondrion	45.29	35.07
CDY33220	Canola	peroxisome	56.05	35.01
CDX75771	Canola	peroxisome	57.4	34.88
CDY39114	Canola	peroxisome	57.4	34.88
CDY33221	Canola	peroxisome	57.4	34.88
CDX82484	Canola	peroxisome	57.4	34.88
CDX82483	Canola	peroxisome	58.3	34.85
CDX98453	Canola	peroxisome	57.4	34.59
CDX97574	Canola	peroxisome	57.4	34.59
CDY39115	Canola	peroxisome	56.5	34.33
EER93339	Sorghum	peroxisome	56.5	34.24
Os07t0152900-01	Rice	peroxisome	56.5	34.15
Os03t0786100-01	Rice	peroxisome	56.5	34.15
KXG34415	Sorghum	peroxisome	56.5	34.15
TraesCS5A01G424400.1	Wheat	peroxisome	55.61	33.51
TraesCS5B01G426500.1	Wheat	golgi	55.61	33.51
TraesCS5D01G432900.1	Wheat	peroxisome	55.61	33.51
CDY55631	Canola	peroxisome	55.16	33.42
TraesCS2A01G250800.1	Wheat	peroxisome	55.16	33.42
TraesCS2D01G251800.2	Wheat	peroxisome, plastid	55.16	33.42
CDY01535	Canola	peroxisome	54.71	33.15
HORVU2Hr1G060010.5	Barley	peroxisome	55.16	32.98
Os08t0198700-01	Rice	vacuole	10.31	32.86
TraesCS2B01G264100.2	Wheat	peroxisome, plastid	55.16	32.71
CDX97573	Canola	peroxisome	54.26	31.76
CDX78843	Canola	peroxisome	52.02	31.52
CDX99474	Canola	peroxisome	50.67	30.71
Zm00001d018810_P002	Maize	peroxisome, plastid	57.4	30.62
Os04t0623600-01	Rice	extracellular	11.21	25.51
CDY39098	Canola	peroxisome	34.53	22.71
CDY39100	Canola	peroxisome	35.87	22.28
CDY52265	Canola	peroxisome	35.87	22.16
CDY33247	Canola	peroxisome	35.87	22.04
CDX75747	Canola	peroxisome	35.87	22.04
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	35.43	21.29
CDY13160	Canola	peroxisome	10.76	21.24
CDX82499	Canola	peroxisome	33.63	20.78
CDY35448	Canola	peroxisome	10.31	20.35
HORVU2Hr1G060070.1	Barley	peroxisome	13.9	19.75
CDY40892	Canola	peroxisome	15.25	19.65
CDX96897	Canola	peroxisome	14.35	18.39
CDX97546	Canola	peroxisome	36.32	11.28
CDY49371	Canola	peroxisome	0.45	1.72
CDX98452	Canola	cytosol, nucleus, peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:CDX86782	EnsemblPlantsGene:GSBRNA2T00145514001	Gene3D:3.20.20.70	GO:A0A078DCI9	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	InterPro:Aldolase_TIM	InterPro:FMN-dep_DH	InterPro:FMN_HAD
InterPro:IPR013785	InterPro:IPR037396	PANTHER:PTHR10578	PANTHER:PTHR10578:SF103	PFAM:PF01070	PFscan:PS51349
ProteinID:CDX86782	ProteinID:CDX86782.1	SUPFAM:SSF51395	UniParc:UPI0004EE3027	MapMan:35.1	:

Description

BnaA09g21720D

Coordinates

chrLK031847:+:667573..668850

Molecular Weight (calculated)

24709.9 Da

IEP (calculated)

9.952

GRAVY (calculated)

-0.038

Length

223 amino acids

Sequence
(BLAST)

001: MAPYYNIRYA FDRFTVVDEN RNLRVNRIRL EKQTGSCSLT KQNLVSIYCN EGFGLGIKQD RYATTVLGFK ISMSTMVAPT AMQKMAHPEE GCSITKLLLQ
101: TLSSWATSSV EEVGSTGPGI RFFQLYVSSM ARYNYSLMNV VAQLVRRTES AGFKAIALTA NDSGLASYVA GQIDRTLSWK DVKWLQKITN LPLLVKGVLT
201: AEDARMAVQT GAASIIVFNH GPR

Best Arabidopsis Sequence Match ( AT3G14420.1 )
(BLAST)

001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL

Arabidopsis Description

GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.