CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98452	Canola	cytosol, nucleus, peroxisome	7.87	100.0
CDY25425	Canola	peroxisome	86.61	92.44
CDX68646	Canola	peroxisome	86.61	92.44
CDX81437	Canola	peroxisome	86.61	92.44
CDY33221	Canola	peroxisome	88.98	92.37
CDX75771	Canola	peroxisome	88.71	92.1
CDY39114	Canola	peroxisome	88.71	92.1
CDX82484	Canola	peroxisome	88.45	91.83
CDY33220	Canola	peroxisome	85.56	91.32
CDY39115	Canola	peroxisome	87.93	91.28
CDX98453	Canola	peroxisome	87.4	90.0
CDX97574	Canola	peroxisome	87.4	90.0
CDX82483	Canola	peroxisome	87.4	89.28
CDX98451	Canola	peroxisome	71.65	89.22
AT3G14415.2	Thale cress	peroxisome	87.14	89.01
CDY40892	Canola	peroxisome	39.63	87.28
Solyc07g056540.2.1	Tomato	plastid	82.15	84.37
CDY40891	Canola	peroxisome	68.24	83.6
CDX81438	Canola	peroxisome	68.24	83.6
CDY11082	Canola	peroxisome	68.24	83.6
CDY16268	Canola	peroxisome	68.24	83.6
KRH43857	Soybean	peroxisome	81.36	83.56
PGSC0003DMT400071115	Potato	cytosol	81.36	83.56
KRH13608	Soybean	nucleus	80.58	82.75
VIT_10s0003g03830.t01	Wine grape	peroxisome	80.31	82.26
CDY25424	Canola	peroxisome	70.34	80.0
CDY55631	Canola	peroxisome	76.64	79.35
CDY01535	Canola	peroxisome	76.12	78.8
CDX68645	Canola	peroxisome	69.29	78.34
CDY35618	Canola	peroxisome	69.29	78.34
CDX99474	Canola	peroxisome	72.7	75.27
CDX78843	Canola	peroxisome	72.7	75.27
GSMUA_Achr4P22900_001	Banana	peroxisome	29.92	74.03
Bra027339.1-P	Field mustard	peroxisome	89.5	72.71
CDX75772	Canola	mitochondrion	48.03	63.54
CDX88442	Canola	cytosol, mitochondrion, plastid	18.9	61.54
CDY70372	Canola	cytosol, mitochondrion, plastid	18.9	61.54
CDY39098	Canola	peroxisome	52.23	58.7
CDY33247	Canola	peroxisome	54.86	57.58
CDY39100	Canola	peroxisome	54.07	57.38
CDX75747	Canola	peroxisome	54.07	56.75
CDY13160	Canola	peroxisome	16.54	55.75
CDY35448	Canola	peroxisome	16.54	55.75
CDX82499	Canola	peroxisome	52.49	55.4
CDY52265	Canola	peroxisome	51.97	54.85
CDY52449	Canola	mitochondrion	31.23	54.59
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	53.02	54.45
CDX86782	Canola	cytosol, peroxisome, plastid	31.76	54.26
CDY49371	Canola	peroxisome	8.14	53.45
CDX96897	Canola	peroxisome	20.21	44.25
CDX97546	Canola	peroxisome	52.23	27.72

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	GO:A0A078EE19	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	EnsemblPlants:CDX97573
ProteinID:CDX97573	ProteinID:CDX97573.1	InterPro:FMN-dep_DH	InterPro:FMN_HAD	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00104788001	InterPro:IPR013785	InterPro:IPR037396	PFAM:PF01070	PIRSF:PIRSF000138
PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF80	SUPFAM:SSF51395	UniParc:UPI0004EF0F79	SEG:seg

Description

BnaA05g25060D

Coordinates

chrLK031900:+:373056..376237

Molecular Weight (calculated)

42226.1 Da

IEP (calculated)

9.483

GRAVY (calculated)

-0.136

Length

381 amino acids

Sequence
(BLAST)

001: MEITNVTEYE AIAKEKLPKM VYDYFASGAE DEWTLQENRN SFARILFRPR ILIDVSKIDM TTTILGFKIS MPIMVAPTAM QKMAHPEGEY ATARAASAAG
101: TIMILSSWTT SSVEEVASTG PGIQFFQIRF FQLQVYKNRK VVEQLVRRAE RAGFKAIVLT GDAPRLGRRE SDIKNRFTLP PNLALKNFEG LDHGKIDEAN
201: DSGLASYAGG QIDRTLSWKD VQWLQTITNM PILVKGVLTG EDARIAIQAG AAGIIVSNPV RLVTGQRQPT ISALEEVVKA TQGRVPVFLD GGVRRGTDVF
301: KALALGASGI FIGRPVVFSL AAEGEAGVRK VLQMLRDEFE LTMALSGCRS LSEITRNHIV TEWDTPRHLP KLYRDHQTRE Q

Best Arabidopsis Sequence Match ( AT3G14415.1 )
(BLAST)

001: MEITNVTEYD AIAKAKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVNKIDM ATTVLGFKIS MPIMVAPTAF QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDIQWLQ TITNMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFALAAEGE AGVKKVLQML RDEFELTMAL SGCRSLSEIT RNHIVTEWDT PRHLPRL

Arabidopsis Description

GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.