Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70372 | Canola | cytosol, mitochondrion, plastid | 100.0 | 100.0 |
| CDY40891 | Canola | peroxisome | 69.23 | 26.05 |
| CDX81438 | Canola | peroxisome | 69.23 | 26.05 |
| CDY16268 | Canola | peroxisome | 69.23 | 26.05 |
| CDY11082 | Canola | peroxisome | 69.23 | 26.05 |
| CDX98451 | Canola | peroxisome | 64.96 | 24.84 |
| CDY25424 | Canola | peroxisome | 70.09 | 24.48 |
| CDY52449 | Canola | mitochondrion | 45.3 | 24.31 |
| HORVU0Hr1G013900.4 | Barley | peroxisome | 67.52 | 24.16 |
| CDX68645 | Canola | peroxisome | 69.23 | 24.04 |
| CDY35618 | Canola | peroxisome | 69.23 | 24.04 |
| CDX86782 | Canola | cytosol, peroxisome, plastid | 45.3 | 23.77 |
| CDX75772 | Canola | mitochondrion | 58.12 | 23.61 |
| CDY33220 | Canola | peroxisome | 69.23 | 22.69 |
| CDX68646 | Canola | peroxisome | 68.38 | 22.41 |
| CDY25425 | Canola | peroxisome | 68.38 | 22.41 |
| CDX81437 | Canola | peroxisome | 68.38 | 22.41 |
| EER93339 | Sorghum | peroxisome | 70.09 | 22.28 |
| CDX98453 | Canola | peroxisome | 70.09 | 22.16 |
| CDX97574 | Canola | peroxisome | 70.09 | 22.16 |
| CDY39115 | Canola | peroxisome | 69.23 | 22.07 |
| TraesCS2A01G250800.1 | Wheat | peroxisome | 69.23 | 22.01 |
| TraesCS2D01G251800.2 | Wheat | peroxisome, plastid | 69.23 | 22.01 |
| CDX82483 | Canola | peroxisome | 70.09 | 21.98 |
| Os03t0786100-01 | Rice | peroxisome | 69.23 | 21.95 |
| CDY33221 | Canola | peroxisome | 68.38 | 21.8 |
| CDX75771 | Canola | peroxisome | 68.38 | 21.8 |
| CDY39114 | Canola | peroxisome | 68.38 | 21.8 |
| CDX82484 | Canola | peroxisome | 68.38 | 21.8 |
| HORVU2Hr1G060010.5 | Barley | peroxisome | 69.23 | 21.72 |
| KXG34415 | Sorghum | peroxisome | 68.38 | 21.68 |
| Os07t0152900-01 | Rice | peroxisome | 68.38 | 21.68 |
| TraesCS2B01G264100.2 | Wheat | peroxisome, plastid | 69.23 | 21.54 |
| TraesCS5B01G426500.1 | Wheat | golgi | 67.52 | 21.35 |
| TraesCS5A01G424400.1 | Wheat | peroxisome | 67.52 | 21.35 |
| TraesCS5D01G432900.1 | Wheat | peroxisome | 67.52 | 21.35 |
| CDY55631 | Canola | peroxisome | 64.96 | 20.65 |
| CDY01535 | Canola | peroxisome | 64.1 | 20.38 |
| Zm00001d018810_P002 | Maize | peroxisome, plastid | 67.52 | 18.9 |
| CDX97573 | Canola | peroxisome | 61.54 | 18.9 |
| CDX78843 | Canola | peroxisome | 58.12 | 18.48 |
| CDX99474 | Canola | peroxisome | 55.56 | 17.66 |
| CDY39098 | Canola | peroxisome | 42.73 | 14.75 |
| CDY49371 | Canola | peroxisome | 6.84 | 13.79 |
| CDY33247 | Canola | peroxisome | 42.73 | 13.77 |
| CDY39100 | Canola | peroxisome | 41.88 | 13.65 |
| CDX75747 | Canola | peroxisome | 41.88 | 13.5 |
| CDY52266 | Canola | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 42.73 | 13.48 |
| CDX82499 | Canola | peroxisome | 39.32 | 12.74 |
| CDY52265 | Canola | peroxisome | 36.75 | 11.91 |
| CDX96897 | Canola | peroxisome | 17.09 | 11.49 |
| CDY40892 | Canola | peroxisome | 13.68 | 9.25 |
| Os08t0198700-01 | Rice | vacuole | 4.27 | 7.14 |
| HORVU2Hr1G060070.1 | Barley | peroxisome | 9.4 | 7.01 |
| CDX97546 | Canola | peroxisome | 38.46 | 6.27 |
| CDY13160 | Canola | peroxisome | 5.13 | 5.31 |
| CDY35448 | Canola | peroxisome | 5.13 | 5.31 |
| Os04t0623600-01 | Rice | extracellular | 4.27 | 5.1 |
| CDX98452 | Canola | cytosol, nucleus, peroxisome | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX88442 | EnsemblPlantsGene:GSBRNA2T00147985001 | Gene3D:3.20.20.70 | GO:A0A078JXL8 | GO:GO:0003674 | GO:GO:0003824 |
| InterPro:Aldolase_TIM | InterPro:IPR013785 | PANTHER:PTHR10578 | PANTHER:PTHR10578:SF80 | ProteinID:CDX88442 | ProteinID:CDX88442.1 |
| ProteinID:CDY70372.1 | UniParc:UPI0004EE0840 | UniProt:A0A078JXL8 | MapMan:35.1 | : | : |
Description
BnaC06g38860DBnaC06g38860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXL8]
Coordinates
chrLK031855:+:1026154..1027038
Molecular Weight (calculated)
12878.3 Da
IEP (calculated)
4.895
GRAVY (calculated)
-0.281
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVRLETASG SGTIMSLSSW ATSSVEEVYK DRNVVAQLLR RAERAGFKAI ALTNFEGLDL GKMDMANDSG LASYVAGQID RTLSWKQIDR CEMASDNHKP
101: ATSDERLRPV ALEEVNL
101: ATSDERLRPV ALEEVNL
001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL
Arabidopsis Description
GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.