CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40892	Canola	peroxisome	90.0	15.61
CDX97573	Canola	peroxisome	100.0	7.87
CDY33221	Canola	peroxisome	93.33	7.63
CDX75771	Canola	peroxisome	93.33	7.63
CDY39114	Canola	peroxisome	93.33	7.63
CDX68646	Canola	peroxisome	90.0	7.56
CDX81437	Canola	peroxisome	90.0	7.56
CDY25425	Canola	peroxisome	90.0	7.56
CDX82484	Canola	peroxisome	90.0	7.36
CDY33220	Canola	peroxisome	80.0	6.72
CDX82483	Canola	peroxisome	83.33	6.7
CDY39115	Canola	peroxisome	80.0	6.54
CDX97574	Canola	peroxisome	80.0	6.49
CDX98453	Canola	peroxisome	80.0	6.49
CDY01535	Canola	peroxisome	70.0	5.71
CDY55631	Canola	peroxisome	70.0	5.71
CDX99474	Canola	peroxisome	66.67	5.43
CDX78843	Canola	peroxisome	63.33	5.16
CDY39098	Canola	peroxisome	53.33	4.72
TraesCS5B01G266100.1	Wheat	peroxisome	56.67	4.66
TraesCS2A01G168400.1	Wheat	peroxisome	53.33	4.37
TraesCS2D01G175900.1	Wheat	peroxisome	53.33	4.37
TraesCS5A01G266500.2	Wheat	peroxisome	53.33	4.37
OQU90257	Sorghum	peroxisome	53.33	4.36
OQU90259	Sorghum	peroxisome	53.33	4.35
TraesCS5D01G274300.1	Wheat	peroxisome	50.0	4.1
CDY52265	Canola	peroxisome	46.67	3.88
CDX82499	Canola	peroxisome	46.67	3.88
CDY33247	Canola	peroxisome	46.67	3.86
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	46.67	3.77
CDY39100	Canola	peroxisome	43.33	3.62
CDX75747	Canola	peroxisome	43.33	3.58
GSMUA_Achr3P01940_001	Banana	peroxisome	43.33	3.57
CDX96897	Canola	peroxisome	16.67	2.87
CDX97546	Canola	peroxisome	43.33	1.81
TraesCS2B01G194600.3	Wheat	peroxisome	13.33	1.02
CDY35448	Canola	peroxisome	3.33	0.88
CDY13160	Canola	peroxisome	3.33	0.88
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	3.33	0.84
CDX98451	Canola	peroxisome	6.67	0.65
CDY25424	Canola	peroxisome	6.67	0.6
CDX86782	Canola	cytosol, peroxisome, plastid	0.0	0.0
CDX81438	Canola	peroxisome	0.0	0.0
CDX75772	Canola	mitochondrion	0.0	0.0
CDX88442	Canola	cytosol, mitochondrion, plastid	0.0	0.0
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	0.0	0.0
CDY70372	Canola	cytosol, mitochondrion, plastid	0.0	0.0
Os03t0786000-01	Rice	plastid	0.0	0.0
HORVU6Hr1G051600.1	Barley	peroxisome, plastid	0.0	0.0
CDY52449	Canola	mitochondrion	0.0	0.0
CDY11082	Canola	peroxisome	0.0	0.0
CDY49371	Canola	peroxisome	0.0	0.0
CDY40891	Canola	peroxisome	0.0	0.0
CDY16268	Canola	peroxisome	0.0	0.0
CDX68645	Canola	peroxisome	0.0	0.0
CDY35618	Canola	peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:CDX98452

EnsemblPlantsGene:GSBRNA2T00106064001

ProteinID:CDX98452

ProteinID:CDX98452.1

UniParc:UPI0004EEAF22

MapMan:35.2

Description

BnaC05g39230D

Coordinates

chrLK031905:+:178971..179063

Molecular Weight (calculated)

3462.2 Da

IEP (calculated)

8.560

GRAVY (calculated)

-0.407

Length

30 amino acids

Sequence
(BLAST)

1: MALSGCRSLS EITRNHIVTE WDTPRHLPKL

Best Arabidopsis Sequence Match ( AT3G14415.1 )
(BLAST)

001: MEITNVTEYD AIAKAKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVNKIDM ATTVLGFKIS MPIMVAPTAF QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDIQWLQ TITNMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFALAAEGE AGVKKVLQML RDEFELTMAL SGCRSLSEIT RNHIVTEWDT PRHLPRL

Arabidopsis Description

GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.