Factsheet for HORVU6Hr1G051600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 3
peroxisome 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	nucleus, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G030930.2	Barley	peroxisome	87.72	27.32
Solyc03g122130.2.1	Tomato	peroxisome	54.39	18.08
HORVU0Hr1G013900.4	Barley	peroxisome	50.88	17.74
VIT_09s0002g00810.t01	Wine grape	peroxisome	56.14	17.58
PGSC0003DMT400058960	Potato	peroxisome	54.39	17.03
Solyc03g122170.2.1	Tomato	peroxisome	50.0	16.62
Bra021533.1-P	Field mustard	peroxisome	52.63	16.53
AT3G14130.1	Thale cress	peroxisome	51.75	16.25
Bra021535.1-P	Field mustard	peroxisome	50.88	15.98
PGSC0003DMT400058959	Potato	peroxisome	50.88	15.93
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	57.02	15.62
Bra001536.1-P	Field mustard	peroxisome	49.12	15.51
PGSC0003DMT400058920	Potato	peroxisome	49.12	15.43
HORVU2Hr1G060010.5	Barley	peroxisome	50.0	15.28
Solyc03g122140.2.1	Tomato	peroxisome	48.25	15.15
AT3G14150.1	Thale cress	peroxisome	47.37	14.88
PGSC0003DMT400058950	Potato	peroxisome	37.72	11.41
Bra036980.1-P	Field mustard	peroxisome	5.26	10.53
Solyc03g122150.2.1	Tomato	peroxisome	7.89	5.88
Bra027370.1-P	Field mustard	vacuole	48.25	5.49
Os03t0786000-01	Rice	plastid	11.4	4.81
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	8.77	3.85
KRH25749	Soybean	vacuole	0.88	1.19
HORVU2Hr1G060070.1	Barley	peroxisome	0.88	0.64
CDX98452	Canola	cytosol, nucleus, peroxisome	0.0	0.0
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G051600.1	EnsemblPlantsGene:HORVU6Hr1G051600	Gene3D:3.20.20.70	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Aldolase_TIM	InterPro:FMN-dep_DH	InterPro:FMN_HAD
InterPro:IPR013785	InterPro:IPR037396	PANTHER:PTHR10578	PANTHER:PTHR10578:SF67	PFAM:PF01070	PFscan:PS51349
SEG:seg	SUPFAM:SSF51395	UniParc:UPI000B488731	UniProt:A0A287U627	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr6H:-:314851781..314856258

Molecular Weight (calculated)

12709.1 Da

IEP (calculated)

8.478

GRAVY (calculated)

-0.419

Length

114 amino acids

Sequence
(BLAST)

001: MGLSFSSSSK IEEVASSCNA IRFYQLYVFK NKNVSATLVR RAESHGFKAI VLTVDTPMLG RREGDIRNKM VAPANANLEG LMPIEDLDTT DDSKLEKYAR
101: DRLDPSLHGR TWSG

Best Arabidopsis Sequence Match ( AT3G14130.4 )
(BLAST)

001: MYRFRPRVLV DVSNIDMSTS MLGYPISAPI MIAPTAMHKL AHPKGEIATA KAAAACNTIM IVSFMSTCTI EEVASSCNAV RFLQIYVYKR RDVTAQIVKR
101: AEKAGFKAIV LTVDVPRLGR READIKNKMI SPQLKNFEGL VSTEVRPNEG SGVEAFASSA FDASLSWKDI EWLRSITKLP ILVKGLLTRE DALKAVEAGV
201: DGIVVSNHGA RQLDYSPATI TVLEEVVHAV KGRIPVLLDG GVRRGTDVFK ALALGAQAVL IGRPIVYGLA AKGEDGVKKV IDMLKNEFEI TMALSGCPTI
301: DDVTRNHVRT ENERIKSML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.