Factsheet for Zm00001d024312_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi

Predictor Summary:

mitochondrion 2
peroxisome 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, secretory
Any Predictor:	mitochondrion, peroxisome, secretory
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	82.35	37.69
Bra036980.1-P	Field mustard	peroxisome	8.4	17.54
AT3G14150.1	Thale cress	peroxisome	20.17	6.61
AT3G14130.1	Thale cress	peroxisome	20.17	6.61
Solyc03g122130.2.1	Tomato	peroxisome	18.49	6.41
Bra001536.1-P	Field mustard	peroxisome	19.33	6.37
Bra021535.1-P	Field mustard	peroxisome	19.33	6.34
Bra021533.1-P	Field mustard	peroxisome	19.33	6.34
VIT_09s0002g00810.t01	Wine grape	peroxisome	19.33	6.32
PGSC0003DMT400058960	Potato	peroxisome	19.33	6.32
PGSC0003DMT400058959	Potato	peroxisome	19.33	6.32
Solyc03g122170.2.1	Tomato	peroxisome	17.65	6.12
PGSC0003DMT400058950	Potato	peroxisome	19.33	6.1
Solyc03g122140.2.1	Tomato	peroxisome	18.49	6.06
PGSC0003DMT400058920	Potato	peroxisome	18.49	6.06
Os03t0786000-01	Rice	plastid	12.61	5.56
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	17.65	5.05
Zm00001d002261_P003	Maize	mitochondrion	16.81	5.01
Zm00001d018810_P002	Maize	peroxisome, plastid	15.13	4.31
Zm00001d002260_P003	Maize	peroxisome	16.81	4.2
CDX98452	Canola	cytosol, nucleus, peroxisome	0.84	3.33
Zm00001d006868_P007	Maize	peroxisome	11.76	3.3
Bra027370.1-P	Field mustard	vacuole	20.17	2.4
Solyc03g122150.2.1	Tomato	peroxisome	1.68	1.31
KRH25749	Soybean	vacuole	0.0	0.0
HORVU6Hr1G051600.1	Barley	peroxisome, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d024312_P001	EnsemblPlants:Zm00001d024312_T001	EnsemblPlantsGene:Zm00001d024312	Gene3D:3.20.20.70	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Aldolase_TIM	InterPro:FMN-dep_DH
InterPro:IPR013785	PANTHER:PTHR10578	PANTHER:PTHR10578:SF80	PFAM:PF01070	ProteinID:AQK41011.1	SEG:seg
SUPFAM:SSF51395	UniParc:UPI000843BECD	UniProt:A0A1D6IYR2	MapMan:35.1	:	:

Description

Peroxisomal (S)-2-hydroxy-acid oxidase GLO1

Coordinates

chr10:-:63550609..63551472

Molecular Weight (calculated)

13706.4 Da

IEP (calculated)

5.177

GRAVY (calculated)

-0.225

Length

119 amino acids

Sequence
(BLAST)

001: MQKRQERAPH VFILLSHPPF LAPTHCHCTC VVLCCVLQEE EEEEEQVLRS LPARVTTSIY GGDHQAFAKQ KLPKMAYDYY ASGAEDEWTL QENREAFSRI
101: LFALDAQAIE GRFLIVTMY

Best Arabidopsis Sequence Match ( AT3G14420.1 )
(BLAST)

001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL

Arabidopsis Description

GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.