Factsheet for Bra021535.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39100	Canola	peroxisome	97.8	98.89
Bra021533.1-P	Field mustard	peroxisome	95.87	95.87
AT3G14130.1	Thale cress	peroxisome	88.15	88.15
Bra001536.1-P	Field mustard	peroxisome	86.78	87.26
AT3G14150.1	Thale cress	peroxisome	86.78	86.78
Solyc03g122170.2.1	Tomato	peroxisome	70.52	74.64
VIT_09s0002g00810.t01	Wine grape	peroxisome	74.66	74.45
PGSC0003DMT400058959	Potato	peroxisome	73.83	73.63
Bra036980.1-P	Field mustard	peroxisome	11.29	71.93
Solyc03g122130.2.1	Tomato	peroxisome	66.67	70.55
PGSC0003DMT400058960	Potato	peroxisome	69.97	69.78
GSMUA_Achr3P01940_001	Banana	peroxisome	69.42	69.23
PGSC0003DMT400058920	Potato	peroxisome	68.87	68.87
Solyc03g122140.2.1	Tomato	peroxisome	67.77	67.77
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	74.93	65.38
Os07t0616500-01	Rice	peroxisome	64.46	63.93
HORVU2Hr1G030930.2	Barley	peroxisome	63.91	63.39
OQU90257	Sorghum	peroxisome	63.36	62.67
TraesCS2A01G168400.1	Wheat	peroxisome	63.09	62.57
TraesCS2D01G175900.1	Wheat	peroxisome	63.09	62.57
TraesCS5A01G266500.2	Wheat	peroxisome	61.98	61.48
PGSC0003DMT400058950	Potato	peroxisome	63.64	61.27
OQU90259	Sorghum	peroxisome	61.71	60.87
TraesCS5D01G274300.1	Wheat	peroxisome	60.88	60.38
TraesCS5B01G266100.1	Wheat	peroxisome	60.61	60.27
Bra001550.1-P	Field mustard	peroxisome	60.33	59.67
Bra021555.1-P	Field mustard	peroxisome	56.75	59.37
Bra013299.1-P	Field mustard	peroxisome	59.5	59.02
Bra021556.1-P	Field mustard	peroxisome	59.5	58.86
Bra012602.1-P	Field mustard	peroxisome	59.23	58.42
Bra005793.1-P	Field mustard	peroxisome	18.73	58.12
Bra027338.1-P	Field mustard	peroxisome	59.23	58.11
Bra001551.1-P	Field mustard	peroxisome	56.75	57.54
Solyc03g122150.2.1	Tomato	peroxisome	22.59	53.59
HORVU6Hr1G051600.1	Barley	peroxisome, plastid	15.98	50.88
Zm00001d006868_P007	Maize	peroxisome	58.95	50.47
Bra027339.1-P	Field mustard	peroxisome	56.75	43.92
TraesCS2B01G194600.3	Wheat	peroxisome	44.63	41.43
Bra035032.1-P	Field mustard	mitochondrion	21.49	35.78
Bra027370.1-P	Field mustard	vacuole	80.17	29.07
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	6.34	19.33
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	13.77	19.23
Os03t0786000-01	Rice	plastid	11.85	15.93

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	EnsemblPlantsGene:Bra021535	EnsemblPlants:Bra021535.1
EnsemblPlants:Bra021535.1-P	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396	UniProt:M4DYD9	PFAM:PF01070	PIRSF:PIRSF000138
ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF67	SMART:SM01240	SUPFAM:SSF51395
UniParc:UPI0002544385	SEG:seg	:	:	:	:

Description

AT3G14130 (E=2e-181) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative

Coordinates

chrA01:+:24695152..24697312

Molecular Weight (calculated)

39851.7 Da

IEP (calculated)

7.880

GRAVY (calculated)

0.061

Length

363 amino acids

Sequence
(BLAST)

001: MDQIVNVNEF QELAKRALPK MYYDFYSGGA EDQHTLKENV EAFTRIMFRP RVLVDVSKID MSTRILGYPI SAPIMIAPTA MHMLAHPQGE TATAKAAAAC
101: NTIMIVSYMA SCTIEEVASS CNAVRFLQIY VYKRRDVTAQ MVKRAEKAGF KAIVLTVDVP KFGRREADIK NKMVCPQLRN FEGLISTEVL PSEGSGVEAL
201: ASSTFDASLT WKDIEWLRSI TKLPIMVKGI LTREDALRAI EAGVDGIVVS NHGARQLDYS PATITVLEEI VHVVGGRVPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPVV YGLAAKGEDG VRKVIDMLKN ELELTMALSG CPTIDDITRN NVRTESERLK SML

Best Arabidopsis Sequence Match ( AT3G14130.1 )
(BLAST)

001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.