Factsheet for PGSC0003DMT400058950

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058920	Potato	peroxisome	74.8	77.69
PGSC0003DMT400058960	Potato	peroxisome	73.21	75.82
PGSC0003DMT400058959	Potato	peroxisome	72.15	74.73
Solyc03g122150.2.1	Tomato	peroxisome	28.38	69.93
VIT_09s0002g00810.t01	Wine grape	peroxisome	63.4	65.66
AT3G14150.1	Thale cress	peroxisome	61.8	64.19
CDX75747	Canola	peroxisome	61.54	63.91
CDY39100	Canola	peroxisome	60.74	63.79
CDY33247	Canola	peroxisome	61.27	63.64
Bra021535.1-P	Field mustard	peroxisome	61.27	63.64
Bra021533.1-P	Field mustard	peroxisome	61.01	63.36
AT3G14130.1	Thale cress	peroxisome	60.74	63.09
CDX82499	Canola	peroxisome	59.95	62.6
CDY39098	Canola	peroxisome	55.97	62.24
Bra001536.1-P	Field mustard	peroxisome	59.42	62.05
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	61.01	61.99
CDY52265	Canola	peroxisome	58.89	61.5
CDY13160	Canola	peroxisome	18.3	61.06
CDY35448	Canola	peroxisome	18.3	61.06
GSMUA_Achr3P01940_001	Banana	peroxisome	58.09	60.16
Bra036980.1-P	Field mustard	peroxisome	9.02	59.65
OQU90257	Sorghum	peroxisome	57.82	59.4
Os07t0616500-01	Rice	peroxisome	55.7	57.38
TraesCS2D01G175900.1	Wheat	peroxisome	55.7	57.38
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	63.13	57.21
HORVU2Hr1G030930.2	Barley	peroxisome	55.44	57.1
TraesCS5A01G266500.2	Wheat	peroxisome	55.17	56.83
TraesCS2A01G168400.1	Wheat	peroxisome	54.91	56.56
TraesCS5D01G274300.1	Wheat	peroxisome	54.38	56.01
OQU90259	Sorghum	peroxisome	54.64	55.98
TraesCS5B01G266100.1	Wheat	peroxisome	53.58	55.34
CDY49371	Canola	peroxisome	8.49	55.17
PGSC0003DMT400019434	Potato	peroxisome	51.19	52.45
PGSC0003DMT400054730	Potato	peroxisome	51.46	52.29
PGSC0003DMT400071115	Potato	cytosol	51.19	52.02
Zm00001d006868_P007	Maize	peroxisome	51.72	45.99
KRH25749	Soybean	vacuole	9.55	42.86
HORVU6Hr1G051600.1	Barley	peroxisome, plastid	11.41	37.72
TraesCS2B01G194600.3	Wheat	peroxisome	38.2	36.83
CDX97546	Canola	peroxisome	59.42	31.2
Bra027370.1-P	Field mustard	vacuole	59.15	22.28
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	13.53	19.62
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	6.1	19.33
Os03t0786000-01	Rice	plastid	10.08	14.07

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	InterPro:FMN-dep_DH	InterPro:FMN_HAD
InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396
UniProt:M1C3K7	PFAM:PF01070	EnsemblPlantsGene:PGSC0003DMG402022901	PGSC:PGSC0003DMG402022901	EnsemblPlants:PGSC0003DMT400058950	PIRSF:PIRSF000138
ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF67	SUPFAM:SSF51395	UniParc:UPI000295A6F9

Description

Glycolate oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG402022901]

Coordinates

chr3:+:61316806..61321122

Molecular Weight (calculated)

41612.9 Da

IEP (calculated)

9.161

GRAVY (calculated)

0.026

Length

377 amino acids

Sequence
(BLAST)

001: MAGEPVNVNE FEELARQALP NMYYDFFAGG AEDQYTLEEN IEAFRRIIIR PRILVDVSRI DMSTVILGHK TSAPIMIAPT MMHKFAHPEG EIATARGAAS
101: RDVIAGLSFT CKVVRFIQTF ALKREITEHM VRQAESNGFR AIILTTDTPA LGRRKADITN KMIAPQLRNF EGLLSTKFVS EKACAAETLD RSFCWKEIAW
201: LKSVTKLPIL IKGILTSEDA MKAIEAGVAG IIVSNHGARQ LDYTPATISV LEEVVHVVQG KVPVLIEGGI RRGTDIFKAL ALGAKAVLIG RPVIYGLAAK
301: GESGVKQVIE MLKNELEQTM ALAGCCTVAD ITRNYVKTEK ERVHMEARLN SDRIVQSPFG SAPNRILFIP KARTRDF

Best Arabidopsis Sequence Match ( AT3G14130.1 )
(BLAST)

001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.