Factsheet for TraesCS2B01G194600.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G175900.1	Wheat	peroxisome	67.01	71.58
TraesCS2A01G168400.1	Wheat	peroxisome	66.75	71.31
HORVU2Hr1G030930.2	Barley	peroxisome	66.24	70.77
TraesCS5B01G266100.1	Wheat	peroxisome	58.57	62.74
OQU90257	Sorghum	peroxisome	58.57	62.4
Os07t0616500-01	Rice	peroxisome	58.31	62.3
OQU90259	Sorghum	peroxisome	57.29	60.87
Zm00001d006868_P007	Maize	peroxisome	59.85	55.19
GSMUA_Achr3P01940_001	Banana	peroxisome	48.59	52.2
VIT_09s0002g00810.t01	Wine grape	peroxisome	45.01	48.35
AT3G14130.1	Thale cress	peroxisome	42.46	45.73
Bra021533.1-P	Field mustard	peroxisome	42.2	45.45
AT3G14150.1	Thale cress	peroxisome	41.94	45.18
Bra021535.1-P	Field mustard	peroxisome	41.43	44.63
PGSC0003DMT400058960	Potato	peroxisome	41.43	44.51
Bra001536.1-P	Field mustard	peroxisome	40.92	44.32
Solyc03g122150.2.1	Tomato	peroxisome	17.14	43.79
PGSC0003DMT400058959	Potato	peroxisome	40.66	43.68
PGSC0003DMT400058920	Potato	peroxisome	40.15	43.25
Solyc03g122140.2.1	Tomato	peroxisome	40.15	43.25
Solyc03g122130.2.1	Tomato	peroxisome	37.85	43.15
Solyc03g122170.2.1	Tomato	peroxisome	37.08	42.27
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	44.5	41.83
TraesCS5B01G426500.1	Wheat	golgi	38.62	40.81
TraesCS2B01G490700.1	Wheat	peroxisome	37.85	40.11
TraesCS2B01G264100.2	Wheat	peroxisome, plastid	38.11	39.63
PGSC0003DMT400058950	Potato	peroxisome	36.83	38.2
KRH25749	Soybean	vacuole	7.93	36.9
Bra036980.1-P	Field mustard	peroxisome	3.07	21.05
Bra027370.1-P	Field mustard	vacuole	41.18	16.08
CDX98452	Canola	cytosol, nucleus, peroxisome	1.02	13.33

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	InterPro:FMN-dep_DH	InterPro:FMN_HAD
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396	PFAM:PF01070
PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF67	SUPFAM:SSF51395	EnsemblPlantsGene:TraesCS2B01G194600	EnsemblPlants:TraesCS2B01G194600.3
TIGR:cd02809	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:171461358..171464194

Molecular Weight (calculated)

41735.4 Da

IEP (calculated)

8.485

GRAVY (calculated)

-0.472

Length

391 amino acids

Sequence
(BLAST)

001: MENNLPVNIR EYQELAKKAL PKMHYDYING GAEDEHTLRD NIAAYGRILL RPRVLVDVSN IDMSINLLGY DMPSPIIVAP TGSHKLANPE GEVATARAAA
101: SCNTLMVLSF SASCKIEEVA SSCNAIRFYQ LYVFKNRDVS ATLVRRAESH GFKAIVLTVD TPMLGRREAD IRNKMVAPAN ANLEGLMPID DLDTTGGSKL
201: EKYARDTLDP SLSWKDVEWL KSITSLPILL KGIVTAEDGK SVNAVRDLHS HSEDKFVDHL LSFILHEMLN NQGGGANSQE SSGGRGSRHH RVQPRRSAAR
301: LRAGHHIRPR RGSEGGGGGG PGAGGRRSPA GDRPAQGAGA GCAGSHGGEA GAVRAGSEGP GGGEARDRDA QQGAGAGHGA LRLPERCRDH P

Best Arabidopsis Sequence Match ( AT3G14130.1 )
(BLAST)

001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.