Factsheet for Solyc03g122140.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058920	Potato	peroxisome	95.59	95.59
Solyc03g122130.2.1	Tomato	peroxisome	77.96	82.51
Solyc03g122170.2.1	Tomato	peroxisome	75.21	79.59
VIT_09s0002g00810.t01	Wine grape	peroxisome	71.9	71.7
Solyc03g122160.1.1	Tomato	cytosol, nucleus, peroxisome	19.83	69.23
CDX75747	Canola	peroxisome	69.15	69.15
Solyc03g122150.2.1	Tomato	peroxisome	28.93	68.63
AT3G14150.1	Thale cress	peroxisome	68.32	68.32
AT3G14130.1	Thale cress	peroxisome	68.04	68.04
CDY39100	Canola	peroxisome	67.22	67.97
Bra021535.1-P	Field mustard	peroxisome	67.77	67.77
CDX82499	Canola	peroxisome	67.22	67.59
CDY33247	Canola	peroxisome	67.49	67.49
Bra021533.1-P	Field mustard	peroxisome	67.22	67.22
Bra001536.1-P	Field mustard	peroxisome	66.39	66.76
GSMUA_Achr3P01940_001	Banana	peroxisome	66.94	66.76
CDY39098	Canola	peroxisome	62.26	66.67
CDY35448	Canola	peroxisome	20.66	66.37
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	67.77	66.31
CDY52265	Canola	peroxisome	65.56	65.93
CDY13160	Canola	peroxisome	20.39	65.49
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	74.1	64.66
TraesCS2A01G168400.1	Wheat	peroxisome	63.91	63.39
TraesCS2D01G175900.1	Wheat	peroxisome	63.64	63.11
HORVU2Hr1G030930.2	Barley	peroxisome	63.64	63.11
OQU90257	Sorghum	peroxisome	63.64	62.94
Os07t0616500-01	Rice	peroxisome	62.81	62.3
TraesCS5A01G266500.2	Wheat	peroxisome	61.98	61.48
OQU90259	Sorghum	peroxisome	62.26	61.41
TraesCS5D01G274300.1	Wheat	peroxisome	61.43	60.93
TraesCS5B01G266100.1	Wheat	peroxisome	60.88	60.55
Bra036980.1-P	Field mustard	peroxisome	9.37	59.65
CDY49371	Canola	peroxisome	9.09	56.9
Solyc10g007600.2.1	Tomato	plastid	56.75	55.53
Solyc07g056540.2.1	Tomato	plastid	55.92	54.72
Solyc08g048250.2.1	Tomato	nucleus	56.2	53.83
Zm00001d006868_P007	Maize	peroxisome	58.13	49.76
HORVU6Hr1G051600.1	Barley	peroxisome, plastid	15.15	48.25
KRH25749	Soybean	vacuole	10.19	44.05
TraesCS2B01G194600.3	Wheat	peroxisome	43.25	40.15
CDX97546	Canola	peroxisome	65.84	33.29
Bra027370.1-P	Field mustard	vacuole	65.84	23.88
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	13.5	18.85
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	6.06	18.49
Os03t0786000-01	Rice	plastid	11.85	15.93

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	InterPro:FMN-dep_DH	InterPro:FMN_HAD
InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396
UniProt:K4BN12	PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578
PANTHER:PTHR10578:SF67	SMART:SM01240	SUPFAM:SSF51395	EnsemblPlantsGene:Solyc03g122140.2	EnsemblPlants:Solyc03g122140.2.1	UniParc:UPI00027657D4

Description

No Description!

Coordinates

chr3:-:70082466..70085406

Molecular Weight (calculated)

39409.9 Da

IEP (calculated)

7.853

GRAVY (calculated)

0.034

Length

363 amino acids

Sequence
(BLAST)

001: MAGEPVNVNE FEELARQVLP KISYDFFSGG AEDQHTLKQN IEAFRRITIR PRILVDVSKI DMSTIILGHK TSAPIIVAPT SSHQLAHPEG EVATARGAAA
101: CNVIMGVAFT STCTMEEVAS SCKAVRFIQT FAFKREITAN MVQRAERNGF RAIILTADTP RLGRKEADIK NKMIAPPFKN FEGLISTVAV SDKGSNVEAY
201: AAETLDPSFC WKDIAWLKSI TKLPILIKGV LTGEDATKAI EAGVAGIIVS NHGARQLDYT PATISALEEV VHAVQVKVPV LFDGGIRRGT DIFKALALGA
301: KAVLIGRPVI YGLAAKGETG VKQVIEMLKN ELEQTMALAG CRTVDDITRS HVNTETERME CRM

Best Arabidopsis Sequence Match ( AT3G14130.1 )
(BLAST)

001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.