CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90259	Sorghum	peroxisome	91.55	91.3
TraesCS2D01G175900.1	Wheat	peroxisome	86.38	86.61
TraesCS2A01G168400.1	Wheat	peroxisome	85.83	86.07
HORVU2Hr1G030930.2	Barley	peroxisome	85.83	86.07
TraesCS5A01G266500.2	Wheat	peroxisome	85.01	85.25
Os07t0616500-01	Rice	peroxisome	83.92	84.15
TraesCS5D01G274300.1	Wheat	peroxisome	83.92	84.15
TraesCS5B01G266100.1	Wheat	peroxisome	83.38	83.84
Zm00001d006868_P007	Maize	peroxisome	91.28	79.01
GSMUA_Achr3P01940_001	Banana	peroxisome	72.48	73.08
VIT_09s0002g00810.t01	Wine grape	peroxisome	67.03	67.58
AT3G14130.1	Thale cress	peroxisome	65.12	65.84
PGSC0003DMT400058960	Potato	peroxisome	65.12	65.66
PGSC0003DMT400058959	Potato	peroxisome	64.58	65.11
Solyc03g122170.2.1	Tomato	peroxisome	60.76	65.01
Solyc03g122130.2.1	Tomato	peroxisome	60.76	65.01
Bra021533.1-P	Field mustard	peroxisome	64.31	65.01
AT3G14150.1	Thale cress	peroxisome	63.49	64.19
PGSC0003DMT400058920	Potato	peroxisome	63.22	63.91
Solyc03g122140.2.1	Tomato	peroxisome	62.94	63.64
Bra021535.1-P	Field mustard	peroxisome	62.67	63.36
Bra001536.1-P	Field mustard	peroxisome	61.58	62.6
EER93339	Sorghum	peroxisome	61.31	61.14
KXG34415	Sorghum	peroxisome	60.49	60.16
Bra036980.1-P	Field mustard	peroxisome	9.26	59.65
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	66.48	58.65
TraesCS2B01G194600.3	Wheat	peroxisome	62.4	58.57
PGSC0003DMT400058950	Potato	peroxisome	59.4	57.82
EES11447	Sorghum	peroxisome	56.68	56.68
CDX98452	Canola	cytosol, nucleus, peroxisome	4.36	53.33
EES11443	Sorghum	peroxisome	59.13	52.29
Solyc03g122150.2.1	Tomato	peroxisome	20.16	48.37
KRH25749	Soybean	vacuole	9.26	40.48
Bra027370.1-P	Field mustard	vacuole	61.31	22.48

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	EntrezGene:8060683	UniProt:A0A1W0W769	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN
InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:IPR013785	InterPro:IPR037396	EnsemblPlants:OQU90257	ProteinID:OQU90257	ProteinID:OQU90257.1	ProteinID:OQU90258.1
PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF67
SMART:SM01240	EnsemblPlantsGene:SORBI_3002G374650	SUPFAM:SSF51395	UniParc:UPI0001A83929	RefSeq:XP_002461016.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:73247929..73253132

Molecular Weight (calculated)

39869.4 Da

IEP (calculated)

7.024

GRAVY (calculated)

0.023

Length

367 amino acids

Sequence
(BLAST)

001: MEDNLPVNVR EYQELAKKAL PKMHYDYING GAEDEYTLRE NIAAYGRILL RPRVLIDVSK IDMSTSLLGY NMPSPIIVAP TGSHKFANPE GEVATARAAA
101: ACNTIMVLSF SSNCRIEEVA SSCDAIRFYQ LYVYKRRDVS ATLVRRAESL GFRAIVLTVD TPVLGRREAD IRNKMIAPQL SNLEGLMSLD DFDGGEGGSK
201: LERFSRETLD PSLSWKDVEW LKSITSLPIL LKGIVTAEDA RKAVEVGVAG VIVSNHGARQ LDYAPPTISA LEEVVKAVAG AVPVLVDGGV RRGTDVLKAL
301: ALGAKAVMVG RPVFYGLAAR GEAGARHVIE MLNKELELAM ALCGCRSVAE VTRAHVQTEG DRIRALL

Best Arabidopsis Sequence Match ( AT3G14130.1 )
(BLAST)

001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.