Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 6
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P19880_001 | Banana | peroxisome | 73.02 | 72.63 |
| KXG34415 | Sorghum | peroxisome | 70.84 | 70.46 |
| EER93339 | Sorghum | peroxisome | 70.3 | 70.11 |
| EES11443 | Sorghum | peroxisome | 76.29 | 67.47 |
| Zm00001d002260_P003 | Maize | peroxisome | 78.75 | 60.71 |
| OQU90259 | Sorghum | peroxisome | 57.22 | 57.07 |
| OQU90257 | Sorghum | peroxisome | 56.68 | 56.68 |
Protein Annotations
| MapMan:1.3.2 | Gene3D:3.20.20.70 | InterPro:Aldolase_TIM | InterPro:Alpha-hydoxy_acid_DH_FMN | UniProt:C5YG64 | EnsemblPlants:EES11447 |
| ProteinID:EES11447 | ProteinID:EES11447.1 | InterPro:FMN-dep_DH | InterPro:FMN_HAD | InterPro:FMN_hydac_DH_AS | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010181 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR013785 | InterPro:IPR037396 | PFAM:PF01070 | PIRSF:PIRSF000138 |
| ScanProsite:PS00557 | PFscan:PS51349 | PANTHER:PTHR10578 | PANTHER:PTHR10578:SF72 | EnsemblPlantsGene:SORBI_3006G220600 | SUPFAM:SSF51395 |
| unigene:Sbi.5306 | UniParc:UPI0001A86F9F | RefSeq:XP_002447119.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:+:56748070..56751113
Molecular Weight (calculated)
40384.2 Da
IEP (calculated)
8.696
GRAVY (calculated)
0.045
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MALITNLSDY EELARQKLPK MVYDFYAGGA EDQWTLKENK EAFSKILFRP RVLIDVSRID MSTSILGYKI SMPIMVAPTA LHKLAHREGE VASAQATAAA
101: GTIMTLSSWS SCSIEEVNSS APGLRFFQLS VFKDRDIVQQ LVRRAENAGY KAIAVTVDAP RLGRREADVR NRFTLPENVV LKCFEGLDLS KIDKTNALGL
201: AAYVTSQIDS SLSWKDIKWL QTITRLPILV KGVITAEDAR LAIECGVAGI IMSNHGGRQL DYLPATISCL EEVVREAKGR VPVFLDSGIR RGTDVFKALA
301: LGASGVFIGR PVLFALAVDG KAGVRNALQM LRDELEITMA LSGCTSLKDI TRDHVITESD MIRRSRM
101: GTIMTLSSWS SCSIEEVNSS APGLRFFQLS VFKDRDIVQQ LVRRAENAGY KAIAVTVDAP RLGRREADVR NRFTLPENVV LKCFEGLDLS KIDKTNALGL
201: AAYVTSQIDS SLSWKDIKWL QTITRLPILV KGVITAEDAR LAIECGVAGI IMSNHGGRQL DYLPATISCL EEVVREAKGR VPVFLDSGIR RGTDVFKALA
301: LGASGVFIGR PVLFALAVDG KAGVRNALQM LRDELEITMA LSGCTSLKDI TRDHVITESD MIRRSRM
001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL
Arabidopsis Description
GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.