Factsheet for Zm00001d002260_P003

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11447	Sorghum	peroxisome	60.71	78.75
GSMUA_Achr6P19880_001	Banana	peroxisome	48.11	62.06
Zm00001d002261_P003	Maize	mitochondrion	50.84	60.65
Zm00001d018810_P002	Maize	peroxisome, plastid	46.22	52.63
Zm00001d006868_P007	Maize	peroxisome	34.87	39.15
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	4.2	16.81
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	8.61	15.77

Protein Annotations

EntrezGene:100285987	Gene3D:3.20.20.70	MapMan:50.1.1	UniProt:A0A1D6DYT6	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN
InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:IPR013785	InterPro:IPR037396	ProteinID:ONM13725.1	ProteinID:ONM13726.1	PFAM:PF01070	ScanProsite:PS00557
PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF72	SUPFAM:SSF51395	UniParc:UPI0008435E5C	EnsemblPlantsGene:Zm00001d002260
EnsemblPlants:Zm00001d002260_P003	EnsemblPlants:Zm00001d002260_T003	SEG:seg	:	:	:

Description

Peroxisomal (S)-2-hydroxy-acid oxidase GLO1

Coordinates

chr2:-:9089887..9093334

Molecular Weight (calculated)

52035.0 Da

IEP (calculated)

9.874

GRAVY (calculated)

0.106

Length

476 amino acids

Sequence
(BLAST)

001: MANSSPMGDS LQLQSVEFHS RTAGRTVLLQ IYFEHREMAL ITNVSDYEEL AKQKLPKMVY DFYAGGAEDQ WTLKENKEAF SKILFRPRVL IDVSHIDMST
101: SILGYKISMP IMVAPTALHK LAHQEGEVAS AQAAAAAGTI MVCKIAPLYR LSGRSHMNSF TGCIFRRCLH GHLAALRKLA QLHQDSVSSN FQYSRIGISC
201: NSLSEGLKML AIRQSPSLST LHALVAGKPM SGTGHIVVLQ SGLFVVPCVP RFRLPENVVL KCFEGLDLSK MDKTKGSGLA AYATSQIDSS LSWKDIKWLQ
301: TITGLPILVK GVITAEDARI AIECGVAGII VSNHGGRQLD YLPATISCLE EVCKSITAQL PRTPLVHGLM LTYLGKGKLQ VVREAKGRRV PVFLDGGIRR
401: GTDVFKALAL GASGVFIGRP VLFALAVDGR AGVRNALRML RDELEITMAL SGCASLKDIT RDRVITERDM IRRSRI

Best Arabidopsis Sequence Match ( AT3G14415.1 )
(BLAST)

001: MEITNVTEYD AIAKAKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVNKIDM ATTVLGFKIS MPIMVAPTAF QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDIQWLQ TITNMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFALAAEGE AGVKKVLQML RDEFELTMAL SGCRSLSEIT RNHIVTEWDT PRHLPRL

Arabidopsis Description

GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.