Factsheet for Zm00001d002261_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
peroxisome 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	peroxisome

extracellular: 20408568
mitochondrion: 27297264
plasma membrane: 27341663
cytosol: 28250383

msms PMID: 28250383 doi

CN Meisrimler, F Buck, S Lüthje

University Hospital Eppendorf, Institute of Clinical Chemistry, Campus Science, Martinistraße 52, D-20246 Hamburg, Germany. buck@uke.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. c_m_2406@yahoo.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. s.luthje@botanik.uni-hamburg.de.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0623500-02	Rice	peroxisome	84.46	91.83
TraesCS2A01G467700.1	Wheat	golgi, peroxisome	83.21	89.97
EES11443	Sorghum	peroxisome	93.48	89.88
TraesCS2D01G467700.1	Wheat	peroxisome	82.96	89.7
TraesCS2B01G490700.1	Wheat	peroxisome	82.71	89.43
GSMUA_Achr6P19880_001	Banana	peroxisome	75.44	81.57
Zm00001d018810_P002	Maize	peroxisome, plastid	75.19	71.77
Zm00001d002260_P003	Maize	peroxisome	60.65	50.84
Zm00001d006868_P007	Maize	peroxisome	51.13	48.11
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	11.78	18.08
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	5.01	16.81

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	UniProt:A0A1D6DYU9	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	InterPro:FMN-dep_DH
InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785
InterPro:IPR037396	ProteinID:ONM13736.1	PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349
PANTHER:PTHR10578	PANTHER:PTHR10578:SF70	SUPFAM:SSF51395	UniParc:UPI00022087A0	EnsemblPlantsGene:Zm00001d002261	EnsemblPlants:Zm00001d002261_P003
EnsemblPlants:Zm00001d002261_T003	SEG:seg	:	:	:	:

Description

Peroxisomal (S)-2-hydroxy-acid oxidase GLO1

Coordinates

chr2:-:9094317..9098515

Molecular Weight (calculated)

43922.5 Da

IEP (calculated)

9.747

GRAVY (calculated)

-0.011

Length

399 amino acids

Sequence
(BLAST)

001: MRPLCSNPPL HSKSHGGSHR SLARLRFPCS LGMELITNVT EYEKLAKERL PKMVYDYYAS GAEDQWTLKE NREAFSRILF RPRVLIDVSR IDMATNILGF
101: SISMPIMIAP SAMQKMAHPD GELATARAAA SAGTIMTLSS WSTSSVEEVN SVGPGIRFFQ LYVYKDRNIV RQLVKRAEMA GFKAIALTVD TPILGRREAD
201: IKNRFALPPH LVLKNFQALD LGTMDKTNDS GLASYVAGQV DRTLSWKDVK WLQTITSLPI LVKGIVTAED TRLAIEYGAA GIIVSNHGAR QLDYVPATIS
301: CLEEVVREAK GRLPVFLDGG VRRGTDVFKA LALGASGVFI GRPVLFSLAV DGEAGVRKVL QMLRDELELT MALSGCTSLR EITRAHVITD SDRIGRSRL

Best Arabidopsis Sequence Match ( AT4G18360.1 )
(BLAST)

001: MEITNVMEYE KIAKEKLPKM VYDYYASGAE DQWTLQENRN AFSRILFRPR ILIDVSKIDV STTVLGFNIS MPIMIAPTAM QKMAHPDGEL ATARATSAAG
101: TIMTLSSWAT CSVEEVASTG PGIRFFQLYV YKDRNVVIQL VKRAEEAGFK AIALTVDTPR LGRRESDIKN RFALPRGLTL KNFEGLDLGK IDKTNDSGLA
201: SYVAGQVDQS LSWKDIKWLQ SITSLPILVK GVITAEDARI AVEYGAAGII VSNHGARQLD YVPATIVALE EVVKAVEGRI PVFLDGGVRR GTDVFKALAL
301: GASGVFVGRP SLFSLAADGE AGVRKMLQML RDEFELTMAL SGCRSLREIS RTHIKTDWDT PHYLSAKL

Arabidopsis Description

GLO5Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [Source:UniProtKB/Swiss-Prot;Acc:O49506]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.