Factsheet for Zm00001d023759_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus

Predictor Summary:

mitochondrion 2
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, peroxisome
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	37.69	82.35
Bra036980.1-P	Field mustard	peroxisome	4.62	21.05
PGSC0003DMT400058959	Potato	peroxisome	20.0	14.29
VIT_09s0002g00810.t01	Wine grape	peroxisome	20.0	14.29
Solyc03g122170.2.1	Tomato	peroxisome	18.85	14.29
AT3G14150.1	Thale cress	peroxisome	19.62	14.05
PGSC0003DMT400058920	Potato	peroxisome	19.62	14.05
Bra021535.1-P	Field mustard	peroxisome	19.23	13.77
Bra021533.1-P	Field mustard	peroxisome	19.23	13.77
PGSC0003DMT400058960	Potato	peroxisome	19.23	13.74
Os03t0786000-01	Rice	plastid	14.23	13.7
PGSC0003DMT400058950	Potato	peroxisome	19.62	13.53
AT3G14130.1	Thale cress	peroxisome	18.85	13.5
Solyc03g122140.2.1	Tomato	peroxisome	18.85	13.5
Bra001536.1-P	Field mustard	peroxisome	18.46	13.3
Solyc03g122130.2.1	Tomato	peroxisome	17.31	13.12
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	19.62	12.26
Zm00001d002261_P003	Maize	mitochondrion	18.08	11.78
Solyc03g122150.2.1	Tomato	peroxisome	6.92	11.76
Zm00001d018810_P002	Maize	peroxisome, plastid	17.69	11.0
KRH25749	Soybean	vacuole	3.46	10.71
Zm00001d006868_P007	Maize	peroxisome	16.92	10.38
HORVU6Hr1G051600.1	Barley	peroxisome, plastid	3.85	8.77
Zm00001d002260_P003	Maize	peroxisome	15.77	8.61
Bra027370.1-P	Field mustard	vacuole	20.38	5.29
CDX98452	Canola	cytosol, nucleus, peroxisome	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.20.20.70	MapMan:35.2	UniProt:A0A1D6IVF6	ProteinID:AQK39984.1	InterPro:ARM-like
InterPro:Aldolase_TIM	InterPro:FMN-dep_DH	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:IPR011989	InterPro:IPR013785	PFAM:PF01070	PANTHER:PTHR10578
PANTHER:PTHR10578:SF80	SUPFAM:SSF51395	UniParc:UPI00084296A9	EnsemblPlantsGene:Zm00001d023759	EnsemblPlants:Zm00001d023759_P001	EnsemblPlants:Zm00001d023759_T001
SEG:seg	:	:	:	:	:

Description

Peroxisomal (S)-2-hydroxy-acid oxidase GLO4

Coordinates

chr10:+:19056769..19063074

Molecular Weight (calculated)

29248.1 Da

IEP (calculated)

6.235

GRAVY (calculated)

-0.202

Length

260 amino acids

Sequence
(BLAST)

001: MGEVAPVIPV TRRRTMSRKA AGAVEADRPA EDVSEEKTSK ITIALNQEAE AVAVASKEEK GTGCTVPLRL YHFLNIVYKT REYEFLRLTS LGVIGALVKL
101: FQLPELFDDQ VMHRCCQFLW ADLIPCRTQQ SSIIFLHDSK MSQVAAATPQ TTAIRADQKR QERAPHVFIL LSHPPFLAPT HCHCTCVVLC CVLQEEEEEE
201: EHVLRSLPAR FTTSIYGGDH QAFAKQKLPK MAYDYYASGA EDEWTLQENM EAFSRILSSG

Best Arabidopsis Sequence Match ( AT3G14420.1 )
(BLAST)

001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL

Arabidopsis Description

GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.