Factsheet for Solyc03g122170.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058959	Potato	peroxisome	95.34	89.84
Solyc03g122130.2.1	Tomato	peroxisome	80.76	80.76
Solyc03g122140.2.1	Tomato	peroxisome	79.59	75.21
Bra021535.1-P	Field mustard	peroxisome	74.64	70.52
CDY39100	Canola	peroxisome	73.76	70.47
AT3G14150.1	Thale cress	peroxisome	74.34	70.25
CDY33247	Canola	peroxisome	74.34	70.25
VIT_09s0002g00810.t01	Wine grape	peroxisome	74.34	70.05
AT3G14130.1	Thale cress	peroxisome	74.05	69.97
Bra021533.1-P	Field mustard	peroxisome	73.47	69.42
CDY39098	Canola	peroxisome	67.35	68.14
CDX75747	Canola	peroxisome	72.01	68.04
CDX82499	Canola	peroxisome	71.14	67.59
Bra001536.1-P	Field mustard	peroxisome	70.85	67.31
Bra036980.1-P	Field mustard	peroxisome	11.08	66.67
CDY52265	Canola	peroxisome	69.97	66.48
Solyc03g122160.1.1	Tomato	cytosol, nucleus, peroxisome	19.83	65.38
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	70.26	64.96
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	78.13	64.42
CDY49371	Canola	peroxisome	10.79	63.79
GSMUA_Achr3P01940_001	Banana	peroxisome	67.06	63.19
OQU90257	Sorghum	peroxisome	65.01	60.76
TraesCS2D01G175900.1	Wheat	peroxisome	64.43	60.38
TraesCS2A01G168400.1	Wheat	peroxisome	64.43	60.38
HORVU2Hr1G030930.2	Barley	peroxisome	64.14	60.11
Os07t0616500-01	Rice	peroxisome	63.56	59.56
Solyc07g056540.2.1	Tomato	plastid	64.14	59.3
CDY13160	Canola	peroxisome	19.53	59.29
Solyc10g007600.2.1	Tomato	plastid	63.56	58.76
CDY35448	Canola	peroxisome	19.24	58.41
TraesCS5A01G266500.2	Wheat	peroxisome	62.1	58.2
OQU90259	Sorghum	peroxisome	62.1	57.88
TraesCS5D01G274300.1	Wheat	peroxisome	61.52	57.65
TraesCS5B01G266100.1	Wheat	peroxisome	60.93	57.26
Solyc08g048250.2.1	Tomato	nucleus	61.52	55.67
Solyc03g122150.2.1	Tomato	peroxisome	23.03	51.63
HORVU6Hr1G051600.1	Barley	peroxisome, plastid	16.62	50.0
Zm00001d006868_P007	Maize	peroxisome	58.6	47.41
KRH25749	Soybean	vacuole	11.08	45.24
TraesCS2B01G194600.3	Wheat	peroxisome	42.27	37.08
CDX97546	Canola	peroxisome	70.55	33.7
Bra027370.1-P	Field mustard	vacuole	70.85	24.28
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	14.29	18.85
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	6.12	17.65
Os03t0786000-01	Rice	plastid	11.37	14.44

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	InterPro:FMN-dep_DH	InterPro:FMN_HAD
InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396
UniProt:K4BN15	PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578
PANTHER:PTHR10578:SF67	SUPFAM:SSF51395	EnsemblPlantsGene:Solyc03g122170.2	EnsemblPlants:Solyc03g122170.2.1	UniParc:UPI00027657D7	:

Description

No Description!

Coordinates

chr3:+:70091655..70095510

Molecular Weight (calculated)

37535.9 Da

IEP (calculated)

7.526

GRAVY (calculated)

0.148

Length

343 amino acids

Sequence
(BLAST)

001: MYYDYYTGGA EDQHTLKENV EAFSRIIIRP RILVDVSKID MSTTILGHKT SAPIMIAPTA MHKLAHHEGE VATARGAAAC DIIMGLSYMS TCTVEEIASS
101: CNAVRFFQIY VYKRRDITAL MVHRAEKNGF GAIILTADTP RLGRREADIK NKMIAPQLKN FEGLISTEYV SDKGSNIEAL AAVTFDASLC WKDIEWLKSI
201: TKLPILIKGV LTSEDAIKAI EAGVAGIIVS NHGARQLDYA PATISVLEEV VHAVQGKVPV FFDGGVRRGT DIFKALALGA KAVLIGRAVI YGLAAKGEVG
301: VKQVIQMLRD ELELTMALSG CCSVEDITRN HVITEKERFI CRM

Best Arabidopsis Sequence Match ( AT3G14130.1 )
(BLAST)

001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.